| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0792 |
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| Symbol | setB |
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| ID | 6269609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 742913 |
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| End bp | 744094 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641724971 |
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| Product | sugar efflux transporter B |
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| Protein accession | YP_001879498 |
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| Protein GI | 187733654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000601589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAACT CCCCCGCAGT CTCCAGCGCG AAATCGTTTG ACCTGACCTC GACGGCGTTT
TTAATCGTTG CCTTTCTCAC CGGTATTGCG GGTGCTCTGC AAACCCCGAC ACTCAGTATT
TTCCTTACCG ATGAAGTACA TGCCCGTCCG GCGATGGTGG GATTCTTCTT TACCGGCAGC
GCTGTCATTG GGATTCTGGT AAGTCAGTTT CTCGCTGGGC GCTCTGATAA GCGCGGCGAT
CGCAAATCGC TGATTGTCTT TTGCTGCCTG TTAGGCGTGC TGGCCTGCAC CCTTTTTGCC
TGGAATCGCA ACTACTTTGT TTTGCTATTC GTTGGCGTCT TTCTTAGCAG CTTTGGCTCG
ACCGCTAACC CGCAAATGTT TGCCCTTGCC CGTGAACATG CCGACAAAAC CGGACGTGAG
GCGGTGATGT TCAGCTCTTT TTTACGCGCT CAGGTTTCAC TGGCATGGGT CATTGGCCCA
CCGCTGGCTT ATGCGTTAGC GATGGGTTTC AGCTTTACGG TAATGTATCT GAGCGCAGCG
GTAGCGTTTA TTGTTTGCGG CGTGATGGTG TGGCTGTTTT TACCGTCGAT GCAAAAAGAG
CTTCCGCTGG CGACCGGCAC GGTTGAAGCG CCGCGCCGTA ACCGTCGCGA TACGCTACTG
CTGTTTGTCA TTTGTACATT GATGTGGGGC TCGAACAGCC TGTACATCAT CAACATGCCG
CTATTTATTA TCAACGAACT GCATCTTCCC GAGAAACTGG CCGGTGTGAT GATGGGGACC
GCCGCCGGGC TGGAAATCCC GACGATGTTG ATTGCCGGAT ATTTCGCCAA ACGTCTGGGT
AAGCGTTTCT TAATGCGCGT TGCTGCCGTG GGTGGCGTCT GTTTTTACGC AGGAATGCTG
ATGGCGCATT CACCTGCCAT TCTGTTGGGC TTGCAGCTGC TAAATGCTAT TTTTATTGGC
ATTCTGGGCG GCATCGGGAT GCTCTATTTT CAGGATTTGA TGCCCGGTCA GGCAGGTTCA
GCCACCACGC TCTATACCAA CACGTCGCGC GTGGGCTGGA TCATCGCAGG ATCAGTGGCG
GGCATCGTCG CCGAGATCTG GAATTATCAC GCTGTGTTCT GGTTTGCGAT GGTGATGATT
ATCGCCACTC TGTTTTGCTT ACTGCGGATT AAAGATGTTT AA
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| Protein sequence | MHNSPAVSSA KSFDLTSTAF LIVAFLTGIA GALQTPTLSI FLTDEVHARP AMVGFFFTGS
AVIGILVSQF LAGRSDKRGD RKSLIVFCCL LGVLACTLFA WNRNYFVLLF VGVFLSSFGS
TANPQMFALA REHADKTGRE AVMFSSFLRA QVSLAWVIGP PLAYALAMGF SFTVMYLSAA
VAFIVCGVMV WLFLPSMQKE LPLATGTVEA PRRNRRDTLL LFVICTLMWG SNSLYIINMP
LFIINELHLP EKLAGVMMGT AAGLEIPTML IAGYFAKRLG KRFLMRVAAV GGVCFYAGML
MAHSPAILLG LQLLNAIFIG ILGGIGMLYF QDLMPGQAGS ATTLYTNTSR VGWIIAGSVA
GIVAEIWNYH AVFWFAMVMI IATLFCLLRI KDV
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