Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0725 |
Symbol | apbE |
ID | 6269063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 685187 |
End bp | 686242 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724911 |
Product | thiamine biosynthesis lipoprotein ApbE |
Protein accession | YP_001879439 |
Protein GI | 187730105 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0827027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA GCTTTACCCG CGTGGCACTG CTGGCTGCCG CGCTCTTCTT TGTTGGTTGC GATCAAAAAC CACAACCCGC CAAAACCCAC GCTACTGAAG TTACCGTTCT TGAAGGCAAA ACCATGGGTA CCTTCTGGCG TGCCAGCATC CCGGGCATTG ATGCCAAACG CAGTGCCGAA CTTAAAGAAA AGATTCAGAC CCAGCTGGAC GCCGACGATC AGCTGCTTTC GACCTATAAA AAAGATTCCG CGCTGATGCG CTTTAACGAC TCGCAAAGTT TGTCGCCGTG GCCAGTAAGT GAAGCGATGG CCGAAATCGT CACTACCTCG CTGCGCATTG GCGCGAAGAC CGATGGTGCG ATGGATATTA CCGTCGGGCC GCTGGTAAAT CTGTGGGGCT TTGGCCCGGA ACAACAGCCG GTTCAAATTC CGAGCCAGGA ACAGATCGAC GAGATGAAAG CCAAAACTGG TTTACAGCAC CTTACGGTCA TTAATCAGTC GCATCAGCAA TATCTGCAAA AAGACCTGCC GGATTTATAT GTCGATCTCT CTACCGTCGG CGAAGGTTAT GCGGCGGATC ACTTGGCACG CTTGATGGAG CAGGAAGGGA TTTCCCGCTA TCTGGTGTCG GTGGGCGGCG CGCTGAACAG CCGTGGTATG AACGGTGAAG GCCTGCCGTG GCGGGTAGCG ATTCAAAAAC CAACCGATAA AGAAAACGCA GTTCAGGCTG TGGTGGATAT CAACGGTCAT GGGATTAGCA CCTCTGGCAG CTACCGTAAC TATTACGAAC TGGACGGCAA ACGTCTTTCT CATGTTATCG ATCCGCAAAC CGGGCGTCCC ATCGAACACA ATCTGGTATC CGTGACGGTG ATTGCTCCGA CGGCGCTGGA AGCCGATGCC TGGGATACTG GCTTGATGGT ACTCGGGCCG GAGAAAGCCA AAGAGGTTGT TCGCCGGGAA GGGCTGGCGG TTTATATGAT CACCAAAGAA GGCGATAGCT TTAAAACCTG GATGTCACCA CAGTTTAAAA GCTTCCTTGT CAGCGAAAAA AATTAA
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Protein sequence | MEISFTRVAL LAAALFFVGC DQKPQPAKTH ATEVTVLEGK TMGTFWRASI PGIDAKRSAE LKEKIQTQLD ADDQLLSTYK KDSALMRFND SQSLSPWPVS EAMAEIVTTS LRIGAKTDGA MDITVGPLVN LWGFGPEQQP VQIPSQEQID EMKAKTGLQH LTVINQSHQQ YLQKDLPDLY VDLSTVGEGY AADHLARLME QEGISRYLVS VGGALNSRGM NGEGLPWRVA IQKPTDKENA VQAVVDINGH GISTSGSYRN YYELDGKRLS HVIDPQTGRP IEHNLVSVTV IAPTALEADA WDTGLMVLGP EKAKEVVRRE GLAVYMITKE GDSFKTWMSP QFKSFLVSEK N
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