Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0648 |
Symbol | sucD |
ID | 6272361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 619584 |
End bp | 620453 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724845 |
Product | succinyl-CoA synthetase subunit alpha |
Protein accession | YP_001879384 |
Protein GI | 187731649 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTT TAATTGATAA AAACACCAAG GTTATCTGCC AGGGCTTTAC TGGTAGCCAG GGGACTTTCC ACTCAGAACA GGCCATTGCA TACGGCACTA AAATGGTTGG CGGCGTAACC CCAGGTAAAG GCGGTACTAC CCACCTCGGC CTGCCGGTGT TCAACACCGT GCGTGAAGCT GTTGCTGCTA CTGGCGCTAC CGCTTCTGTT ATCTACGTAC CAGCACCGTT CTGCAAAGAC TCCATTCTGG AAGCTATTGA TGCAGGCATC AAACTGATTA TCACCATCAC TGAAGGCATC CCGACGCTGG ATATGCTGAC TGTGAAAGTG AAACTGGACG AAGCCGGCGT TCGTATGATC GGCCCGAACT GCCCGGGCGT TATCACTCCG GGTGAATGCA AAATCGGTAT CCAGCCGGGT CACATTCACA AACCGGGTAA AGTGGGTATC GTTTCCCGTT CCGGTACACT GACCTATGAA GCGGTTAAAC AGACCACGGA TTACGGTTTC GGTCAGTCGA CCTGTGTTGG TATCGGCGGT GACCCGATCC CAGGCTCTAA CTTTATCGAC ATCCTCGAAA TGTTCGAAAA AGATCCGCAG ACCGAAGCGA TCGTGATGAT CGGTGAGATC GGCGGTAGCG CTGAAGAAGA AGCGGCAGCG TACATCAAAG AGCACGTTAC CAAGCCAGTT GTAGGTTACA TCGCTGGTGT GACTGCGCCG AAAGGCAAAC GTATGGGCCA CGCGGGTGCG ATCATTGCCG GTGGGAAAGG GACTGCGGAT GAGAAATTCG CTGCTCTGGA AGCCGCAGGC GTGAAAACCG TTCGCAGCCT GGCGGATATC GGTGAAGCAC TGAAAACTGT TCTGAAATAA
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Protein sequence | MSILIDKNTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLG LPVFNTVREA VAATGATASV IYVPAPFCKD SILEAIDAGI KLIITITEGI PTLDMLTVKV KLDEAGVRMI GPNCPGVITP GECKIGIQPG HIHKPGKVGI VSRSGTLTYE AVKQTTDYGF GQSTCVGIGG DPIPGSNFID ILEMFEKDPQ TEAIVMIGEI GGSAEEEAAA YIKEHVTKPV VGYIAGVTAP KGKRMGHAGA IIAGGKGTAD EKFAALEAAG VKTVRSLADI GEALKTVLK
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