Gene SbBS512_E0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0645 
SymbolsucA 
ID6272456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp614109 
End bp616910 
Gene Length2802 bp 
Protein Length933 aa 
Translation table11 
GC content56% 
IMG OID641724842 
Product2-oxoglutarate dehydrogenase E1 component 
Protein accessionYP_001879381 
Protein GI187731274 
COG category[C] Energy production and conversion 
COG ID[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 
TIGRFAM ID[TIGR00239] 2-oxoglutarate dehydrogenase, E1 component 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACA GCGCTTTGAA AGCCTGGTTG GACTCTTCTT ACCTCTCTGG CGCAAACCAG 
AGCTGGATAG AACAGCTCTA TGAAGACTTC TTAACCGATC CTGACTCGGT TGACGCTAAC
TGGCGTTCGA CGTTCCAGCA GTTACCTGGT ACGGGAGTCA AACCGGATCA ATTCCACTCT
CAAACGCGTG AATATTTCCG CCGCCTGGCG AAAGACGCTT CACGTTACTC TTCAACGATC
TCCGACCCTG ACACCAATGT GAAGCAGGTT AAAGTCCTGC AGCTCATTAA CGCATACCGC
TTCCGTGGTC ACCAGCATGC GAATCTCGAT CCGCTGGGAC TGTGGCAGCA AGATAAAGTG
GCCGATCTGG ATCCGTCTTT CCACGATCTG ACCGAAGCAG ACTTCCAGGA AACCTTCAAC
GTCGGTTCAT TTGCCAGCGG CAAAGAAACC ATGAAACTCG GCGAGCTGCT GGAAGCCCTC
AAGCAAACCT ACTGCGGCCC GATTGGTGCC GAGTATATGC ACATCACCAG CACCGAAGAA
AAACGCTGGA TCCAACAGCG TATCGAGTCT GGTCGCGCGA CTTTCAATAG CGAAGAGAAA
AAACGCTTCT TAAGCGAACT GACCGCCGCT GAAGGCCTTG AACGTTACCT CGGCGCAAAA
TTCCCTGGCG CAAAACGCTT CTCGCTGGAA GGCGGTGACG CGTTAATCCC GATGCTTAAA
GAGATGATCC GCCACGCTGG CAACAGCGGC ACCCGCGAAG TGGTTCTCGG GATGGCGCAC
CGTGGTCGTC TGAACGTGCT GGTGAACGTG CTGGGTAAAA AACCGCAAGA CTTGTTCGAC
GAGTTCGCCG GTAAACATAA AGAACACCTC GGCACGGGTG ACGTGAAATA CCACATGGGC
TTCTCGTCTG ACTTCCAGAC CGATGGCGGC CTGGTGCACC TGGCGCTGGC GTTTAACCCG
TCTCACCTTG AGATTGTAAG CCCGGTAGTT ATCGGTTCTG TTCGTGCCCG TCTGGACAGA
CTTGATGAGC CGAGCAGCAA CAAAGTGCTG CCAATCACCA TCCACGGTGA CGCCGCAGTG
ACCGGGCAGG GCGTGGTTCA GGAAACCCTG AACATGTCGA AAGCGCGTGG TTATGAAGTT
GGCGGTACGG TACGTATCGT TATCAACAAC CAGGTTGGTT TCACCACCTC TAATCCGCTG
GATGCCCGTT CTACGCCGTA CTGTACTGAT ATCGGTAAGA TGGTTCAGGC CCCGATTTTC
CACGTTAACG CGGACGATCC GGAAGCCGTT GCCTTTGTGA CCCGTCTGGC GCTCGATTTC
CGTAACACCT TTAAACGTGA TGTCTTCATC GACCTGGTGT GCTACCGCCG TCACGGCCAC
AACGAAGCCG ACGAGCCGAG CGCAACCCAG CCGCTGATGT ATCAGAAAAT CAAAAAACAT
CCGACACCGC GCAAAATCTA CGCTGACAAG CTGGAGCAGG AAAAAGTGGC GACGCTGGAA
GATGCCACCG AGATGGTTAA CCTGTACCGC GATGCGCTGG ATGCTGGCGA TTGCGTAGTG
GCAGAGTGGC GTCCGATGAA CATGCACTCT TTCACCTGGT CGCCGTACCT CAACCACGAA
TGGGACGAAG AGTACCCGAA CAAAGTTGAG ATGAAGCGCC TGCAGGAGCT GGCGAAACGC
ATCAGCACGG TGCCGGAAGC AGTTGAAATG CAGTCTCGCG TTGCCAAGAT TTATGGCGAT
CGCCAGGCGA TGGCTGCCGG TGAGAAACTG TTCGACTGGG GCGGTGCGGA AAACCTCGCT
TACGCCACGC TGGTTGACGA AGGCATTCCG GTTCGCCTGT CGGGTGAAGA CTCCGGTCGC
GGTACCTTCT TCCACCGCCA CGCGGTGATC CACAACCAGT CTAACGGTTC CACTTACACG
CCGCTGCAAC ACATCCATAA CGGGCAGGGC GCGTTCCGCG TCTGGGACTC CGTACTGTCT
GAAGAAGCAG TGCTGGCGTT TGAATACGGT TATGCCACCG CAGAACCACG CACTCTGACC
ATCTGGGAAG CGCAGTTCGG TGACTTCGCT AACGGTGCTC AGGTGGTTAT CGACCAGTTC
ATCTCCTCTG GCGAACAGAA ATGGGGCCGG ATGTGTGGTC TGGTGATGTT GCTGCCGCAC
GGTTATGAAG GGCAGGGGCC GGAGCACTCC TCCGCGCGTC TGGAACGTTA TCTGCAACTT
TGTGCTGAGC AAAACATGCA GGTGTGCGTA CCGTCTACCC CGGCACAGGT TTACCACATG
CTGCGTCGTC AGGCGCTGCG CGGGATGCGT CGTCCGCTGG TCGTGATGTC GCCGAAATCC
CTGCTGCGTC ATCCGCTGGC GGTTTCCAGC CTCGAAGAAC TGGCGAACGG CACCTTCCTG
CCAGCCATCG GTGAAATCGA CGAGCTTGAT CCGAAGGGCG TGAAGCGCGT AGTGATGTGT
TCTGGTAAGG TTTATTACGA CCTGCTGGAA CAGCGTCGTA AGAACAATCA ACACGATGTC
GCCATTGTGC GTATCGAGCA ACTCTACCCG TTCCCGCATA AAGCGATGCA GGAAGTGTTG
CAGCAGTTTG CTCACGTCAA GGATTTTGTC TGGTGCCAGG AAGAGCCGCT CAACCAGGGC
GCATGGTACT GCAGCCAGCA TCATTTCCGT GAAGTGATTC CGTTTGGGGC TTCTCTGCGT
TATGCAGGCC GCCCGGCCTC CGCCTCTCCG GCGGTAGGGT ATATGTCCGT TCACCAGAAA
CAGCAACAAG ATCTGGTTAA TGACGCGCTG AACGTCGAAT AA
 
Protein sequence
MQNSALKAWL DSSYLSGANQ SWIEQLYEDF LTDPDSVDAN WRSTFQQLPG TGVKPDQFHS 
QTREYFRRLA KDASRYSSTI SDPDTNVKQV KVLQLINAYR FRGHQHANLD PLGLWQQDKV
ADLDPSFHDL TEADFQETFN VGSFASGKET MKLGELLEAL KQTYCGPIGA EYMHITSTEE
KRWIQQRIES GRATFNSEEK KRFLSELTAA EGLERYLGAK FPGAKRFSLE GGDALIPMLK
EMIRHAGNSG TREVVLGMAH RGRLNVLVNV LGKKPQDLFD EFAGKHKEHL GTGDVKYHMG
FSSDFQTDGG LVHLALAFNP SHLEIVSPVV IGSVRARLDR LDEPSSNKVL PITIHGDAAV
TGQGVVQETL NMSKARGYEV GGTVRIVINN QVGFTTSNPL DARSTPYCTD IGKMVQAPIF
HVNADDPEAV AFVTRLALDF RNTFKRDVFI DLVCYRRHGH NEADEPSATQ PLMYQKIKKH
PTPRKIYADK LEQEKVATLE DATEMVNLYR DALDAGDCVV AEWRPMNMHS FTWSPYLNHE
WDEEYPNKVE MKRLQELAKR ISTVPEAVEM QSRVAKIYGD RQAMAAGEKL FDWGGAENLA
YATLVDEGIP VRLSGEDSGR GTFFHRHAVI HNQSNGSTYT PLQHIHNGQG AFRVWDSVLS
EEAVLAFEYG YATAEPRTLT IWEAQFGDFA NGAQVVIDQF ISSGEQKWGR MCGLVMLLPH
GYEGQGPEHS SARLERYLQL CAEQNMQVCV PSTPAQVYHM LRRQALRGMR RPLVVMSPKS
LLRHPLAVSS LEELANGTFL PAIGEIDELD PKGVKRVVMC SGKVYYDLLE QRRKNNQHDV
AIVRIEQLYP FPHKAMQEVL QQFAHVKDFV WCQEEPLNQG AWYCSQHHFR EVIPFGASLR
YAGRPASASP AVGYMSVHQK QQQDLVNDAL NVE