Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0625 |
Symbol | phrB |
ID | 6271061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 594924 |
End bp | 596342 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641724823 |
Product | deoxyribodipyrimidine photolyase |
Protein accession | YP_001879362 |
Protein GI | 187734160 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACCC ATCTGGTCTG GTTTCGCCAG GATTTACGTT TGCACGATAA TCTCGCACTG GCTGCCGCCT GCCGCAATTC GTCTGCACGC GTGCTGGCGT TGTATATCGC TACACCACGC CAGTGGGCGA CGCATAACAT GTCGCCGCGT CAGGCTGAAC TTATCAATGC TCAACTGAAT GGGCTACAAA TAGCGCTTGC GGAAAAAGGT ATTCCTTTAT TGTTCCGTGA AGTGGATGAC TTTATCGCCA GTGTCGAAAT AGTTAAACAG GTGTGCGCGG AAAACAGCGT TACCCACCTG TTTTATAACT ATCAGTATGA AGTGAATGAG CGGGCGCGGG ATGTGGAAGT TGAAAGAGCG CTGCGTAACG TGGTGTGTGA AGGATTTGAT GACAGCGTGA TCCTGCCGCC TGGCGCGGTG ATGACCGGTA ATCACGAGAT GTACAAAGTC TTTACGCCTT TTAAGAATGC CTGGCTGAAA CGGCTGCGGG AAGGGATGCC GGAGTGCGTC GCTGCGCCAA AAGTTCGTAG TAGCGGATCG ATAGAGCCCT CGCCATCCAT TACGCTGAAT TATCCTCGTC AGTCTTTCGA TACTGCGCAT TTCCCGGTGG AAGAAAAAGC GGCGATTGCG CAATTACGCC AGTTTTGCCA GAACGGTGCC GGAGAATATG AGCAACAACG AGATTTTCCG GCAGTGGAAG GCACCAGTCG TTTGTCCGCC AGCCTAGCAA CGGGCGGGTT ATCGCCTCGC CAGTGTTTGC ATCGCTTGTT GGCGGAACAG CCGCAGGCGC TGGACGGTGG GGCCGGTAGT GTCTGGCTTA GTGAGCTGAT CTGGCGCGAG TTCTACCGTC ATCTGATGAC GTATTACCCC TCGTTGTGTA AACATTGTCC GTTTATTGCC TGGACGGATC GTGTGCAGTG GCAGAGCAAT CCCGCACATT TACAGGCCTG GCAGGAAGGC AAAACGGGAT ACCCGATTGT CGATGCTGCC ATGCGTCAGC TTAACAGCAC TGGCTGGATG CATAACCGGC TACGGATGAT TACAGCCAGT TTTCTGGTGA AAGATTTGTT GATCGACTGG CGCGAAGGCG AGCGATATTT CATGTCGCAG CTGATTGATG GTGATTTGGC AGCCAATAAC GGTGGCTGGC AGTGGGCCGC TTCAACCGGA ACCGATGCAG CGCCGTATTT TCGTATTTTC AACCCGACAA CCCAGGGCGA GAAATTTGAC CGTGAGGGCG AGTTTATTCG TCGATGGTTA CCGGAGCTGC GCGATGTACC AGGGAAAGCG GTGCATGAGC CGTGGAAGTG GGCGCAGAAA GCAGGTGTGA TGCTGGATTA TCCGCAACCG ATAGTTGATC ACAAAGAGGC AAGGCTGCGA ACGCTGGCAG CGTACGAAGA AGCGAGGAAA GGAGCCTGA
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Protein sequence | MTTHLVWFRQ DLRLHDNLAL AAACRNSSAR VLALYIATPR QWATHNMSPR QAELINAQLN GLQIALAEKG IPLLFREVDD FIASVEIVKQ VCAENSVTHL FYNYQYEVNE RARDVEVERA LRNVVCEGFD DSVILPPGAV MTGNHEMYKV FTPFKNAWLK RLREGMPECV AAPKVRSSGS IEPSPSITLN YPRQSFDTAH FPVEEKAAIA QLRQFCQNGA GEYEQQRDFP AVEGTSRLSA SLATGGLSPR QCLHRLLAEQ PQALDGGAGS VWLSELIWRE FYRHLMTYYP SLCKHCPFIA WTDRVQWQSN PAHLQAWQEG KTGYPIVDAA MRQLNSTGWM HNRLRMITAS FLVKDLLIDW REGERYFMSQ LIDGDLAANN GGWQWAASTG TDAAPYFRIF NPTTQGEKFD REGEFIRRWL PELRDVPGKA VHEPWKWAQK AGVMLDYPQP IVDHKEARLR TLAAYEEARK GA
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