Gene SbBS512_E0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0607 
Symbol 
ID6268471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp578327 
End bp579310 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID641724807 
Producthypothetical protein 
Protein accessionYP_001879346 
Protein GI187733754 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATGA TTTTTACGTC AAGTTGCTGC GATAATTTAT CAATAGATGA GATTATCGAA 
CGTGCTGAAA AAGGCGATTG CGAGGCTCAA TATATTGTTG GGTTTTATTA TAATCGCGAT
AGCGCAATTG ACTCTCCGGA CGACGAAAAG GCCTTTTACT GGCTGAAGCT GGCCGCCGAG
CAAGGTCATT GTGAAGCACA ATATTCCTTA GGACAAAAGT ATACTGAGGA TAAAAGCCGT
CATAAAGATA ATGAGCATGC CATCTTTTGG CTGAAAAAAA CTGCCCTACA AGGCCATACT
TTCGCTTCCA ACGCCCTTGG CTGGATACTG GATCGTGGAG AAGACCCCAA TTATAAAGAA
GCGGTTGTCT GGTATCAGAT AGCCGCGGAG AGCGGAATGT CTTATGCGCA AAATAATCTT
GGGTGGATGT ACAGAAATGG CAACGGAGTC GCAAAAGACT ATGCGCTGGC ATTTTTCTGG
TACAAACAAG CTGCATTACA AGGCCATAGT GACGCGCAAA ACAATCTGGC CGATCTTTAT
GAAGACGGAA AAGGCGTTGC TCAAAACAAG ACACTCGCCG CATTCTGGTA TTTGAAAAGC
GCACAGCAGA GTAATCGGCA CGCCCAGTTT CAAATTGCAT GGGATTATAA CGCTGGCGAA
GGGGTGGACC AGGACTATAA GCAAGCGATG TACTGGTATC TGAAGGCTGC CGCTCAGGAA
AGCGTCGGCG CTTACGTCAA CATCGGTTAT ATGTATAAAC ACGGACAAGG CGTTGAGAAA
GATTATCAGG CTGCCTTTGA ATGGTTTACG AAAGCCGCTG AATGCAATGA CGCCACTGCC
TGGTATAACC TGGCCATTAT GTATCACTAC GGAGAAGGAA GACCTGTCGA TCTCCGACAG
GCTCTCGACC TGTATCGTAA AGTTCAGTCA TCCGGAACCA GAGATGTCAG TCAGGAAATT
CGTGAGACTG AAGATTTACT GTAG
 
Protein sequence
MIMIFTSSCC DNLSIDEIIE RAEKGDCEAQ YIVGFYYNRD SAIDSPDDEK AFYWLKLAAE 
QGHCEAQYSL GQKYTEDKSR HKDNEHAIFW LKKTALQGHT FASNALGWIL DRGEDPNYKE
AVVWYQIAAE SGMSYAQNNL GWMYRNGNGV AKDYALAFFW YKQAALQGHS DAQNNLADLY
EDGKGVAQNK TLAAFWYLKS AQQSNRHAQF QIAWDYNAGE GVDQDYKQAM YWYLKAAAQE
SVGAYVNIGY MYKHGQGVEK DYQAAFEWFT KAAECNDATA WYNLAIMYHY GEGRPVDLRQ
ALDLYRKVQS SGTRDVSQEI RETEDLL