| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0576 |
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| Symbol | nagD |
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| ID | 6272824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 553534 |
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| End bp | 554286 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641724780 |
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| Product | UMP phosphatase |
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| Protein accession | YP_001879327 |
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| Protein GI | 187734039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0275278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATTA AAAATGTAAT TTGCGATATC GACGGCGTGC TGATGCACGA TAACGTCGCC
GTACCGGGTG CAGCGGAATT TTTGCACGGG ATTATGGATA AAGGCCTGCC GCTGGTGTTG
CTGACCAACT ATCCTTCGCA GACTGGGCAA GATCTGGCGA ACCGCTTTGC CACCGCAGGT
GTCGATGTAC CTGACAGCGT GTTTTATACC TCTGCGATGG CGACTGCCGA TTTCCTGCGT
CGCCAGGAAG GCAAGAAAGC GTATGTGGTG GGCGAAGGCG CACTGATTCA TGAACTGTAC
AAAGCCGGTT TCACTATTAC CGATGTGAAC CCTGATTTCG TGATTGTTGG CGAAACGCGT
TCCTACAACT GGGACATGAT GCATAAAGCA GCCTATTTCG TCGCTAACGG TGCACGTTTT
ATCGCCACCA ATCCGGACAC CCACGGGCGC GGTTTTTATC CCGCGTGTGG CGCGTTGTGT
GCAGGCATCG AAAAAATCTC CGGGCGTAAA CCGTTCTATG TTGGTAAACC GAGTCCGTGG
ATCATCCGCG CGGCATTAAA CAAAATGCAG GCGCATTCGG AAGAAACGGT GATTGTCGGC
GATAACCTGC GTACCGATAT TCTGGCGGGC TTCCAGGCAG GTCTGGAAAC GATTCTGGTG
CTTTCTGGTG TTTCATCGCT CGACGATATC GACAGTATGC CGTTCCGCCC AAGCTGGATT
TACCCGTCGG TCGCTGAAAT CGACGTTATC TGA
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| Protein sequence | MTIKNVICDI DGVLMHDNVA VPGAAEFLHG IMDKGLPLVL LTNYPSQTGQ DLANRFATAG
VDVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR
SYNWDMMHKA AYFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW
IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSSLDDI DSMPFRPSWI
YPSVAEIDVI
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