| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0552 |
|---|
| Symbol | kdpB |
|---|
| ID | 6269829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 529363 |
|---|
| End bp | 531411 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641724758 |
|---|
| Product | potassium-transporting ATPase subunit B |
|---|
| Protein accession | YP_001879305 |
|---|
| Protein GI | 187733809 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2216] High-affinity K+ transport system, ATPase chain B |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTA AACAACTGGC GCTATTCGAA CCAACACTTG TCGTTCAGGC GCTGAAAGAA
GCGGTGAAAA AATTAAACCC GCAGGCGCAA TGGCGCAATC CGGTGATGTT TATCGTCTGG
ATCGGCAGTC TGCTGACCAC CTGTATTAGC ATCGCGATGG CAAGCGGTGC GATGCCTGGC
AATGCGCTGT TTAGCGCGGC AATTAGCGGC TGGCTGTGGG TCACCGTACT GTTCGCTAAT
TTCGCCGAGG CGCTGGCAGA AGGCCGCAGT AAAGCGCAGG CCAACAGTCT TAAAGGGGTG
AAAAAAACTG CCTTTGCCCG CAAGCTGCGT GAGCCGAAAT ATGGCGCTGC GGCGGACAAA
GTTCCTGCCG ATCAACTGCG TAAAGGTGAC ATCGTGCTGG TAGAAGCTGG CGATATTATC
CCCTGCGATG GTGAAGTCAT TGAAGGCGGC GCATCGGTCG ATGAAAGCGC CATCACCGGG
GAATCGGCAC CGGTGATCCG TGAATCCGGC GGCGATTTTG CCTCCGTCAC CGGCGGCACG
CGTATTCTTT CTGACTGGCT GGTGATTGAG TGTAGCGTTA ACCCCGGTGA GACATTTCTG
GATCGGATGA TCGCGATGGT GGAAGGCGCA CAGCGACGCA AAACACCGAA CGAGATTGCC
CTGACTATCC TGCTGATTGC TCTGACCATC GTCTTTTTAC TGGCAACCGC CACGCTGTGG
CCGTTTTCCG CGTGGGGCGG TAATGCAGTG AGTGTAACGG TACTGGTGGC GCTGCTGGTC
TGTCTGATCC CAACCACTAT TGGCGGCCTG TTGTCAGCGA TCGGCGTCGC CGGGATGAGT
CGGATGCTGG GCGCGAATGT GATTGCCACC AGCGGACGTG CAGTTGAAGC GGCAGGTGAC
GTTGACGTTC TGCTACTGGA TAAAACCGGC ACCATCACAC TCGGTAACCG TCAGGCGTCG
GAGTTTATCC CTGCGCAGGG CGTGGATGAA AAAACGCTGG CTGACGCCGC ACAACTGGCT
TCGCTGGCTG ATGAAACGCC GGAAGGCCGC AGTATTGTGA TCCTCGCCAA GCAACGTTTT
AACCTGCGCG AGCGCGATGT GCAGTCGCTC CATGCCACCT TTGTACCGTT TACTGCGCAA
AGCCGGATGA GCGGGATCAA CATCGACAAC CGCATGATCC GTAAAGGTTC TGTCGATGCC
ATTCGCCGCC ATGTTGAGGC TAACGGCGGT CACTTCCCTG CCGATGTTGA TCAAAAAGTC
GATCAGGTTG CGCGTCAGGG GGCCACGCCG CTGGTGGTGG TGGAAGGTTC CCGTGTGCTG
GGCGTTATTG CGCTGAAAGA TATCGTCAAA GGCGGTATTA AAGAGCGCTT CGCCCAGCTG
CGCAAAATGG ACATTAAAAC GGTGATGATT ACCGGCGATA ACCGTCTGAC TGCCGCCGCC
ATTGCTGCGG AAGCGGGCGT CGATGATTTT CTCGCCGAAG CGACACCGGA GGCCAAGCTG
GCATTGATTC GTCAGTATCA GGCGGAAAGC CGTTTGGTGG CGATGACCGG CGACGGCACC
AACGATGCTC CGGCGCTGGC GCAAGCAGAT GTCGCGGTGG CGATGAACTC CGGCACCCAG
GCGGCGAAAG AGGCGGGCAA TATGGTCGCT CTCGACTCTA ACCCGACCAA GTTGATCGAG
GTGGTGCATA TTGGCAAACA GATGCTGATG ACCCGTGGCT CGCTGACCAC CTTCAGCATT
GCCAACGATG TGGCGAAATA CTTCGCCATT ATTCCGGCGG CGTTCGCGGC AACGTATCCG
CAGTTAAATG CGCTGAACAT CATGCGCCTG CATTCGCCCG ACTCCGCCAT TCTCAGTGCA
GTCATTTTCA ACGCCTTGAT TATCGTCTTT TTGATTCCTC TGGCGTTAAA AGGCGTGAGT
TATAAACCGC TTACCGCTTC TGCCATGTTG CGCCGTAACT TATGGATTTA CGGTCTGGGT
GGGCTGCTGG TGCCGTTTAT TGGTATCAAA GTCATTGATT TACTGCTGAC CGTTTGCGGT
CTGGTGTGA
|
|---|
| Protein sequence | MSRKQLALFE PTLVVQALKE AVKKLNPQAQ WRNPVMFIVW IGSLLTTCIS IAMASGAMPG
NALFSAAISG WLWVTVLFAN FAEALAEGRS KAQANSLKGV KKTAFARKLR EPKYGAAADK
VPADQLRKGD IVLVEAGDII PCDGEVIEGG ASVDESAITG ESAPVIRESG GDFASVTGGT
RILSDWLVIE CSVNPGETFL DRMIAMVEGA QRRKTPNEIA LTILLIALTI VFLLATATLW
PFSAWGGNAV SVTVLVALLV CLIPTTIGGL LSAIGVAGMS RMLGANVIAT SGRAVEAAGD
VDVLLLDKTG TITLGNRQAS EFIPAQGVDE KTLADAAQLA SLADETPEGR SIVILAKQRF
NLRERDVQSL HATFVPFTAQ SRMSGINIDN RMIRKGSVDA IRRHVEANGG HFPADVDQKV
DQVARQGATP LVVVEGSRVL GVIALKDIVK GGIKERFAQL RKMDIKTVMI TGDNRLTAAA
IAAEAGVDDF LAEATPEAKL ALIRQYQAES RLVAMTGDGT NDAPALAQAD VAVAMNSGTQ
AAKEAGNMVA LDSNPTKLIE VVHIGKQMLM TRGSLTTFSI ANDVAKYFAI IPAAFAATYP
QLNALNIMRL HSPDSAILSA VIFNALIIVF LIPLALKGVS YKPLTASAML RRNLWIYGLG
GLLVPFIGIK VIDLLLTVCG LV
|
|---|
| |