Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0538 |
Symbol | cspE |
ID | 6268816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 516322 |
End bp | 516531 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641724746 |
Product | cold shock protein CspE |
Protein accession | YP_001879293 |
Protein GI | 187731707 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAGA TTAAAGGTAA CGTTAAGTGG TTTAATGAGT CCAAAGGATT CGGTTTCATT ACTCCGGAAG ACGGCAGCAA AGACGTGTTC GTACACTTCT CTGCAATCCA GACTAATGGT TTTAAAACTC TTGCTGAAGG TCAGCGCGTA GAGTTCGAAA TCACTAACGG TGCCAAAGGC CCTTCTGCTG CAAACGTAAT CGCTCTGTAA
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Protein sequence | MSKIKGNVKW FNESKGFGFI TPEDGSKDVF VHFSAIQTNG FKTLAEGQRV EFEITNGAKG PSAANVIAL
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