Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0462 |
Symbol | fimZ |
ID | 6272959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 447454 |
End bp | 448053 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641724683 |
Product | transcriptional regulator FimZ |
Protein accession | YP_001879231 |
Protein GI | 187732058 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.739138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAA CGTCGGTGAT CATTATGGAT ACTCATCCTA TCATCAGAAT GTCTATTGAA GTTCTGTTGC AAAAAAACAG TGAATTGCAG ATTGTCCTGA AAACGGATGA TTACCGCATA ACCATCGATT ATCTCCGAAC CCGTCCTGTT GATTTAATCA TTATGGATAT AGACTTGCCC GGAACAGACG GTTTTACCTT CCTGAAAAGG ATCAAACAAA TCCAGAGCAC AGTGAAAGTG TTATTTTTAT CATCGAAATC AGAATGCTTT TATGCTGGCA GAGCGATACA AGCTGGTGCT AACGGTTTTG TCAGTAAATG CAATGATCAG AATGATATTT TTCATGCCGT TCAGATGATC CTCTCCGGAT ACACGTTTTT TCCCAGCGAA ACGCTTAACT ATATAAAAAG CAATAAATGT AGTACGAATA GTTCAACGGT CACTGTGCTA TCTAATCGTG AAGTGACCAT ATTACGTTAT CTGGTTAGCG GATTATCTAA TAAAGAAATT GCCGATAAGT TATTGCTTAG CAATAAAACA GTTAGTGCGC ATAAATCTAA TATTTATGGC AAGGGTAATG CTGCCAACTT ACTGATTTAG
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Protein sequence | MKPTSVIIMD THPIIRMSIE VLLQKNSELQ IVLKTDDYRI TIDYLRTRPV DLIIMDIDLP GTDGFTFLKR IKQIQSTVKV LFLSSKSECF YAGRAIQAGA NGFVSKCNDQ NDIFHAVQMI LSGYTFFPSE TLNYIKSNKC STNSSTVTVL SNREVTILRY LVSGLSNKEI ADKLLLSNKT VSAHKSNIYG KGNAANLLI
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