| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0428 |
|---|
| Symbol | |
|---|
| ID | 6272124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 417170 |
|---|
| End bp | 417979 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641724656 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001879205 |
|---|
| Protein GI | 187731457 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATA AAGCAACGGA GATCCTGACA GGTAAAGTTA TGCAAAAATC GGTCTTAATT
ACCGGATGTT CCAGTGGAAT TGGCCTGGAA AGCGCACTCG AATTAAAACG CCAGGGTTTT
CATGTGCTGG CAGGTTGCCG AAAACCGGAT GATGTTGAGC GTATGAACAA CATGGGATTT
ACCGGCGTGT TGATCGATCT GGATTCACCA GAAAGTGTTG ATCGCGCAGC AGACGAGGTG
ATCGCCCTGA CCGATAATTG TCTGTATGGG ATCTTTAACA ATGCCGGATT CGGCATGTAT
GGCCCCCTTT CCACCATCAG CCGTGCGCAG ATGGAACAGC AGTTTTCCGC CAACTTTTTC
GGCGCACACC AGCTCACCAT GCGCCTGTTA CCCGCGATGT TACCGCACGG TGAAGGGCGT
ATTGTGATGA CATCATCGGT GATGGGATTA ATCTCCACGC CGGGTCGTGG CGCTTACGCG
GCCAGTAAAT ATGCGCTGGA GGCGTGGTCA GACGCGCTGC GCATGGAGCT ACGCCACAGC
GGAATTAAAG TCAGCCTGAT CGAACCCGGT CCCATTCGTA CTCGCTTCAC CGACAACGTC
AACCAGACGC AAAGTGATAA ACCAGTCGAA AATCCCGGCA TCGCCGCCCG CTTTACGTTG
GGACCGGAAG CGGTGGTCGA CAAAGTGCGC CATGCTTTTA TTAGCGAGAA GCCGAAGATG
CGCTATCCGG TAACGCTGGT GACCTGGGCA GTAATGGTGC TCAAGCGCCT GCTGCCTGGG
CGCGTGATGG ACAAAATATT GCAGGGGTGA
|
|---|
| Protein sequence | MTHKATEILT GKVMQKSVLI TGCSSGIGLE SALELKRQGF HVLAGCRKPD DVERMNNMGF
TGVLIDLDSP ESVDRAADEV IALTDNCLYG IFNNAGFGMY GPLSTISRAQ MEQQFSANFF
GAHQLTMRLL PAMLPHGEGR IVMTSSVMGL ISTPGRGAYA ASKYALEAWS DALRMELRHS
GIKVSLIEPG PIRTRFTDNV NQTQSDKPVE NPGIAARFTL GPEAVVDKVR HAFISEKPKM
RYPVTLVTWA VMVLKRLLPG RVMDKILQG
|
|---|
| |