Gene SbBS512_E0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0423 
Symbol 
ID6271776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp413231 
End bp413689 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content57% 
IMG OID641724651 
Productnodulation efficiency family protein 
Protein accessionYP_001879200 
Protein GI187730444 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAGT TAATGGTCGT TCATCCACAT ATTTTCTGGC TCAGTCTCGG CGGTTTGCTG 
CTGGCAGCCG AGATGCTGGG CGGAAATGGT TATTTGTTGT GGAGCGGCGT GGCAGCGGTG
ATTACCGGCC TGGTGGTCTG GCTGGTGCCG CTGGGTTGGG AGTGGCAAGG GGTAATGTTT
GCCATCCTGA CGCTGCTCGC CGCCTGGCTG TGGTGGAAAT GGTTGTCGCG GCGGGTGCGC
GAACAAAAGC ACAGCGATAG TCATTTAAAC CAGCGCGGGC AGCAGCTGAT TGGCCGACGT
TTTGTGCTGG AATCTCCGCT GGTCAACGGG CGCGGTCATA TGCGCGTCGG TGACAGTTCA
TGGCCTGTCA GCGCCAGCGA GGATCTCGGT GCAGGTACGC ATGTTGAAGT CATTGCGATA
GAAGGGATAA CCCTACATAT CCGAGCCATC TCGTCTTAA
 
Protein sequence
MMELMVVHPH IFWLSLGGLL LAAEMLGGNG YLLWSGVAAV ITGLVVWLVP LGWEWQGVMF 
AILTLLAAWL WWKWLSRRVR EQKHSDSHLN QRGQQLIGRR FVLESPLVNG RGHMRVGDSS
WPVSASEDLG AGTHVEVIAI EGITLHIRAI SS