Gene SbBS512_E0404 details

Gene Information

• Locus tag: SbBS512_E0404
• Symbol: recR
• ID: 6269885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 392663
• End bp: 393268
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641724631
• Product: recombination protein RecR
• Protein accession: YP_001879181
• Protein GI: 187730170
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.00880245
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACCA GCCCGCTGTT AACACAGCTT ATGGAAGCAC TGCGCTGTCT GCCGGGCGTT 
GGCCCGAAGT CGGCGCAGCG TATGGCGTTC ACGCTGCTTC AGCGCGATCG TAGCGGCGGG 
ATGCGTCTGG CGCAGGCGCT CACCCGGGCG ATGTCGGAAA TCGGCCACTG CGCCGATTGC 
CGCACTTTCA CCGAACAGGA AGTCTGTAAC ATCTGTTCGA ATCCGCGTCG TCAGGAAAAC 
GGTCAAATCT GTGTGGTGGA GAGTCCGGCG GACATCTACG CCATTGAGCA GACGGGGCAG 
TTTTCTGGTC GTTATTTTGT GTTGATGGGG CATCTGTCAC CGCTGGACGG CATCGGTCCG 
GATGATATCG GGCTTGACCG TCTGGAACAG CGTCTGGCAG AGGAAAAAAT CACTGAAGTG 
ATCCTCGCCA CCAATCCCAC GGTTGAAGGT GAAGCTACCG CTAACTACAT TGCCGAGCTT 
TGCGCGCAAT ATGACGTGGA AGCCAGCCGA ATCGCTCATG GCGTACCGGT TGGCGGCGAA 
CTGGAAATGG TCGATGGCAC CACGCTGTCA CACTCCCTTG CCGGGCGTCA TAAGATTCGT 
TTTTAA 

 

Protein sequence

MQTSPLLTQL MEALRCLPGV GPKSAQRMAF TLLQRDRSGG MRLAQALTRA MSEIGHCADC 
RTFTEQEVCN ICSNPRRQEN GQICVVESPA DIYAIEQTGQ FSGRYFVLMG HLSPLDGIGP 
DDIGLDRLEQ RLAEEKITEV ILATNPTVEG EATANYIAEL CAQYDVEASR IAHGVPVGGE 
LEMVDGTTLS HSLAGRHKIR F