Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0402 |
Symbol | dnaX |
ID | 6269577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 390350 |
End bp | 392281 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641724629 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001879179 |
Protein GI | 187733496 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0412407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATC AGGTCTTAGC CCGAAAATGG CGCCCACAAA CCTTTGCTGA CGTCGTCGGC CAGGAACATG TGCTGACCGC ACTGGCGAAC GGCTTGTCGT TAGGGCGTAT TCATCATGCT TATCTTTTTT CCGGTACCCG TGGCGTCGGA AAAACCTCTA TCGCCCGACT GCTGGCGAAG GGGCTAAACT GCGAAACCGG CATTACCGCG ACGCCGTGCG GCGTGTGCGA TAACTGTCGT GAAATCGAGC AGGGGCGCTT TGTCGATCTG ATTGAAATCG ACGCCGCCTC GCGCACCAAA GTTGAAGATA CCCGCGACCT GCTGGATAAC GTCCAGTACG CTCCGGCGCG TGGTCGTTTC AAAGTTTATC TGATCGACGA AGTGCATATG CTGTCGCGCC ACAGCTTTAA CGCACTGTTA AAAACCCTTG AAGAGCCGCC GGAGCACGTT AAGTTTCTGC TGGCGACGAC CGATCCACAG AAATTGCCGG TGACGATTTT GTCGCGCTGT TTGCAATTTC ATCTCAAGGC GCTGGATGTC GAGCAAATTC GCCATCAACT TGAGCACATC CTCAACGAAG AACATATCGC TCACGAGCCG CGGGCGTTGC AATTGCTGGC GCGCGCCGCT GAAGGCAGCC TGCGAGATGC CTTAAGTCTG ACCGACCAGG CGATTGCCAG CGGTGACGGC CAGGTTTCAA CCCAGGCAGT CAGTGCGATG CTGGGTACGC TTGATGACGA TCAGGCGCTG TCGCTGGTTG AAGCGATGGT CGAGGCCAAC GGCGAGCGCG TAATGGCGCT GATTAATGAA GCCGCTGCCC GTGGTATCGA GTGGGAAGCG TTGCTGGTGG AAATGCTCGG CCTGTTGCAT CGTATTGCGA TGGTACAACT TTCGCCTGCT GCACTTGGCA ACGACATGGC CGCCATTGAG CTGCGGATGC GTGAACTGGC GCGCACCATA CCGCCGACGG ATATTCAGCT TTACTATCAG ACGCTGTTGA TTGGTCGCAA AGAATTACCG TATGCGCCGG ACCGCCGCAT GGGCGTTGAG ATGACGCTGC TGCGCGCGCT GGCGTTCCAT CCACGTATGC CTCTGCCTGA GCCAGAAGTG CTGCGCCAGT CCTTTGCACC CGTCGCGCCA ACGGCAGTAA TGACGCCAAC CCAGGTGCCG CCGCAACCGC AATCAGCGCC GCAGAAGGCA CCGACTGTAC CGCTCCCGGA AACCACCAGC CAGGTGCTGG CGGCGCGCCA GCAGTTGCAG CGCGTGCAGG GAGCAACCAA AGCAAAAAAG AGTGAACCGG CAGCCGCTAC CCGCGCGCGG CCGGTGAATA ACGCTGCGCT GGAAAGACTG GCTTCGGTCA CCGATCGCGT TCAGGCGCGT CCGGTGCCAT CGGCGCTGGA AAAAGCGCCA GCCAAAAAAG AAGCGTATCG CTGGAAGGCG ACCACTCCGG TGATGCAGCA AAAAGAAGTG GTCGCCACGC CGAAGGCGCT GAAAAAAGCG CTGGAACATG AAAAAACGCC GGAACTGGCG GCGAAGCTAG CGGCAGAAGC CATTGAGCGC GACCCGTGGG CGGCACAGGT GAGTCAACTT TCGCTACCAA AACTGGTCGA ACAGGTGGCC TTAAATGCCT GGAAAGAGGA GAGCGACAAC GCAGTATGTC TGCATTTGCG CTCCTCTCAG CGGCATTTGA ACAACCGCGG TGCACAGCAA AAACTGGCTG AAGCGTTGAG CACGTTAAAA GGTTCAACGG TTGAACTGAC TATCGTTGAA GATGATAATC CCGCGGTGCG TACGCCGCTG GAATGGCGTC AGGCGATATA CGAAGAAAAA CTTGCGCAGG CGCGCGAGTC CATTATTGCG GATAATAATA TTCAGACCCT GCGTCGGTTC TTCGATGCGG AGCTGGATGA AGAAAGTATC CGCCCCATTT GA
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Protein sequence | MSYQVLARKW RPQTFADVVG QEHVLTALAN GLSLGRIHHA YLFSGTRGVG KTSIARLLAK GLNCETGITA TPCGVCDNCR EIEQGRFVDL IEIDAASRTK VEDTRDLLDN VQYAPARGRF KVYLIDEVHM LSRHSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTILSRC LQFHLKALDV EQIRHQLEHI LNEEHIAHEP RALQLLARAA EGSLRDALSL TDQAIASGDG QVSTQAVSAM LGTLDDDQAL SLVEAMVEAN GERVMALINE AAARGIEWEA LLVEMLGLLH RIAMVQLSPA ALGNDMAAIE LRMRELARTI PPTDIQLYYQ TLLIGRKELP YAPDRRMGVE MTLLRALAFH PRMPLPEPEV LRQSFAPVAP TAVMTPTQVP PQPQSAPQKA PTVPLPETTS QVLAARQQLQ RVQGATKAKK SEPAAATRAR PVNNAALERL ASVTDRVQAR PVPSALEKAP AKKEAYRWKA TTPVMQQKEV VATPKALKKA LEHEKTPELA AKLAAEAIER DPWAAQVSQL SLPKLVEQVA LNAWKEESDN AVCLHLRSSQ RHLNNRGAQQ KLAEALSTLK GSTVELTIVE DDNPAVRTPL EWRQAIYEEK LAQARESIIA DNNIQTLRRF FDAELDEESI RPI
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