Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0346 |
Symbol | thiJ |
ID | 6271691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 337100 |
End bp | 337690 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641724584 |
Product | DJ-1 family protein |
Protein accession | YP_001879134 |
Protein GI | 187731173 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01383] DJ-1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAT CGGCACTGGT TTGCCTCGCC CCTGGTAGTG AAGAGACTGA AGCCGTCACC ACGATCGACC TCTTGGTTCG CGGCGGTATC AAAGTCACCA CTGCCAGCGT AGCCAGCGAT GGCAACCTGG CAATTACCTG CTCGCGCGGC GTGAAGCTGC TGGCGGATGC GCCGCTGGTC GAGGTGGCTG ATGGCGAATA TGACGTGATC GTACTGCCTG GTGGCATTAA AGGCGCAGAG TGTTTTCGCG ATAGCACTCT GCTGGTTGAA ACCGTTAAAC AGTTCCACCG TTCCGGGCGT ATCGTCGCGG CTATTTGCGC CGCGCCAGCC ACCGTGCTGG TGCCGCACGA TATCTTCCCG ATTGGTAATA TGACCGGCTT CCCGACGCTG AAAGACAAAA TTCCCGCTGA ACAATGGCAG GACAAGCGCG TCGTCTGGGA TGCACGGGTA AAATTGCTGA CCAGCCAGGG GCCGGGGACA GCTATCGACT TTGGTCTGAA AATTATCGAC CTGCTGGTTG GGCGCGAGAA AGCCCATGAA GTGGCATCAC AACTGGTGAT GGCGGCAGGG ATTTATAATT ATTACGAGTA G
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Protein sequence | MSASALVCLA PGSEETEAVT TIDLLVRGGI KVTTASVASD GNLAITCSRG VKLLADAPLV EVADGEYDVI VLPGGIKGAE CFRDSTLLVE TVKQFHRSGR IVAAICAAPA TVLVPHDIFP IGNMTGFPTL KDKIPAEQWQ DKRVVWDARV KLLTSQGPGT AIDFGLKIID LLVGREKAHE VASQLVMAAG IYNYYE
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