Gene SbBS512_E0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0346 
SymbolthiJ 
ID6271691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp337100 
End bp337690 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID641724584 
ProductDJ-1 family protein 
Protein accessionYP_001879134 
Protein GI187731173 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAT CGGCACTGGT TTGCCTCGCC CCTGGTAGTG AAGAGACTGA AGCCGTCACC 
ACGATCGACC TCTTGGTTCG CGGCGGTATC AAAGTCACCA CTGCCAGCGT AGCCAGCGAT
GGCAACCTGG CAATTACCTG CTCGCGCGGC GTGAAGCTGC TGGCGGATGC GCCGCTGGTC
GAGGTGGCTG ATGGCGAATA TGACGTGATC GTACTGCCTG GTGGCATTAA AGGCGCAGAG
TGTTTTCGCG ATAGCACTCT GCTGGTTGAA ACCGTTAAAC AGTTCCACCG TTCCGGGCGT
ATCGTCGCGG CTATTTGCGC CGCGCCAGCC ACCGTGCTGG TGCCGCACGA TATCTTCCCG
ATTGGTAATA TGACCGGCTT CCCGACGCTG AAAGACAAAA TTCCCGCTGA ACAATGGCAG
GACAAGCGCG TCGTCTGGGA TGCACGGGTA AAATTGCTGA CCAGCCAGGG GCCGGGGACA
GCTATCGACT TTGGTCTGAA AATTATCGAC CTGCTGGTTG GGCGCGAGAA AGCCCATGAA
GTGGCATCAC AACTGGTGAT GGCGGCAGGG ATTTATAATT ATTACGAGTA G
 
Protein sequence
MSASALVCLA PGSEETEAVT TIDLLVRGGI KVTTASVASD GNLAITCSRG VKLLADAPLV 
EVADGEYDVI VLPGGIKGAE CFRDSTLLVE TVKQFHRSGR IVAAICAAPA TVLVPHDIFP
IGNMTGFPTL KDKIPAEQWQ DKRVVWDARV KLLTSQGPGT AIDFGLKIID LLVGREKAHE
VASQLVMAAG IYNYYE