Gene SbBS512_E0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0345 
SymbolthiI 
ID6270057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp335598 
End bp337046 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content52% 
IMG OID641724583 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_001879133 
Protein GI187731644 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA TCATTAAATT GTTCCCGGAA ATCACCATCA AAAGCCAATC TGTGCGCTTG 
CGCTTTATAA AAATCCTTAC CGGGAACATT CGTAACGTTT TAAAGCACTA TGATGAGACG
CTCGCTGTCG TCCGCCACTG GGATAACATC GAAGTTCGCG CAAAAGATGA AAACCAGCGT
CTGGCTATTC GCGACGCCCT GACCCGTATT CCGGGTATCC ACCATATTCT CGAAGTCGAA
GACGTGCCGT TTACCGACAT GCACGATATT TTTGAGAAAG CGTTGGTTCA GTATCGCGAT
CAGCTGGAAG GCAAAACCTT CTGCGTACGC GTGAAGCGCC GTGGCAAACA TGATTTTAGC
TCGATTGATG TGGAACGTTA CGTCGGCGGC GGTTTAAATC AGCATATTGA GTCCGCGCGC
GTGAAGCTGA CCAATCCGGA AGTGACTGTC CATCTGGAAG TGGAAGACGA TCGTCTCCTG
CTGATTAAAG GCCGCTACGA AGGTATTGGC GGTTTCCCGA TCGGCACCCA GGAAGATGTG
CTGTCGCTCA TTTCCGGTGG TTTCGACTCC GGTGTTTCCA GTTATATGTT GATGCGTCGC
GGCTGCCGCG TGCATTACTG TTTCTTTAAC CTTGGCGGCG CGGCGCATGA AATTGGCGTG
CGTCAGGTGG CGCATTATCT GTGGAACCGT TTTGGCAGCT CCCACCGCGT GCGTTTTGTC
GCTATTAATT TCGAACCGGT CGTCGGGGAA ATTCTCGAGA AAATCGACGA CGGTCAGATG
GGCGTTATCC TCAAACGTAT GATGGTGCGT GCCGCGTCTA AAGTGGCTGA ACGTTACGGC
GTACAGGCGC TGGTCACCGG CGAAGCGCTC GGCCAGGTGT CCAGTCAGAC GCTGACCAAC
CTGCGCCTGA TTGATAACGT CTCCGATACG CTGATCCTGC GTCCGCTGAT TTCTTACGAC
AAAGAGCACA TCATCAACCT GGCTCGCCAG ATTGGCACCG AAGACTTTGC TCGCACGATG
CCGGAATATT GCGGTGTTAT CTCCAAAAGC CCGACGGTGA AAGCGGTTAA GTCGAAGATT
GAAGCGGAAG AAGAGAAATT CGACTTCAGC ATTCTCGATA AAGTGGTTGA AGAAGCGAAT
AACGTTGATA TCCGCGAAAT CGCCCAGCAG ACCGAGCAGG AAGTGGTGGA AGTGGAAACC
GTCAATGGCT TCGGCCCGAA CGACGTGATC CTCGATATCC GTTCTATCGA TGAACAGGAA
GATAAGCCAC TGAAAGTCGA AGGGATTGAT GTAGTTTCTC TGCCGTTCTA TAAACTGAGC
ACCAAGTTTG GCGATCTCGA CCAGAACAGA ACCTGGCTAC TGTGGTGTGA GCGCGGGGTG
ATGAGCCGTC TGCAGGCGCT CTATCTGCGC GAGCAGGGCT TTAACAATGT GAAGGTATAT
CGCCTGTAA
 
Protein sequence
MKFIIKLFPE ITIKSQSVRL RFIKILTGNI RNVLKHYDET LAVVRHWDNI EVRAKDENQR 
LAIRDALTRI PGIHHILEVE DVPFTDMHDI FEKALVQYRD QLEGKTFCVR VKRRGKHDFS
SIDVERYVGG GLNQHIESAR VKLTNPEVTV HLEVEDDRLL LIKGRYEGIG GFPIGTQEDV
LSLISGGFDS GVSSYMLMRR GCRVHYCFFN LGGAAHEIGV RQVAHYLWNR FGSSHRVRFV
AINFEPVVGE ILEKIDDGQM GVILKRMMVR AASKVAERYG VQALVTGEAL GQVSSQTLTN
LRLIDNVSDT LILRPLISYD KEHIINLARQ IGTEDFARTM PEYCGVISKS PTVKAVKSKI
EAEEEKFDFS ILDKVVEEAN NVDIREIAQQ TEQEVVEVET VNGFGPNDVI LDIRSIDEQE
DKPLKVEGID VVSLPFYKLS TKFGDLDQNR TWLLWCERGV MSRLQALYLR EQGFNNVKVY
RL