| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0320 |
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| Symbol | brnQ |
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| ID | 6270876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 313084 |
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| End bp | 314403 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641724559 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001879109 |
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| Protein GI | 187731559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.259108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCATC AATTAAGATC GCGCGATATC ATCGCTCTGG GCTTTATGAC ATTTGCGTTG
TTCGTCGGCG CAGGTAACAT TATTTTCCCT CCAATGGTCG GCTTGCAGGC AGGCGAACAC
GTCTGGACTG CGGCATTCGG CTTCCTCATT ACTGCCGTTG GCCTGCCGGT ATTAACGGTA
GTGGCGCTGG CAAAAGTTGG CGGCGGTGTT GACAGCCTCA GCACGCCAAT CGGTAAAGTC
GCTGGCGTGC TGCTGGCAAC GGTTTGTTAC TTGGCGGTGG GGCCGCTTTT CGCTACGCCG
CGTACAGCTA CCGTTTCCTT TGAAGTGGGG ATTGCGCCGC TGACGGGTGA TTCCGCGCTG
CCGCTGTTTA TCTACAGCCT GGTCTATTTC GCTATCGTTA TTCTGGTTTC GCTCTATCCG
GGCAAGCTGC TGGATACCGT GGGCAACTTC CTTGCGCCGC TGAAAATTAT CGCGCTGGTC
ATCCTGTCTG TTGCCGCTAT TGTCTGGCCG GCGGGTTCTA TCAGCACGGC GACTGAGGCT
TATCAAAACG CTGCGTTTTC TAACGGCTTC GTTAACGGCT ATCTGACCAT GGATACGCTG
GGCGCAATGG TGTTTGGTAT CGTTATTGTT AACGCGGCGC GTTCTCGTGG CGTTACCGAA
GCGCGTCTGC TGACCCGTTA TACCGTCTGG GCTGGCCTGA TGGCGGGTGT TGGTCTGACT
CTGCTGTACC TGGCGCTGTT CCGTCTGGGT TCAGACAGCG CGTCGCTGGT CGATCAGTCT
GCAAACGGCG CTGCTATTCT GCATGCTTAC GTTCAGCACA CATTTGGCGG CGGCGGTAGC
TTCCTGCTGG CGGCGTTAAT CTTCATCGCC TGCCTGGTAA CGGCAGTTGG CCTGACCTGT
GCTTGTGCAG AATTCTTTGC CCAGTACGTA CCGCTCTCTT ATCGTACGCT GGTGTTTATC
CTCGGCGGCT TCTCGATGGT GGTGTCTAAC CTCGGCTTAA GCCAGCTGAT CCAGATCTCC
GTACCGGTGC TGACCGCTAT TTATCCGCCG TGTATCGCAC TGGTTGTATT AAGTTTTACA
CGCTCATGGT GGCATAATTC GTCCCGCGTG ATTGCCCCGC CGATGTTTAT CAGCCTGCTT
TTTGGTATTC TCGACGGGAT CAAAGCATCT GCATTCAGCG ATATCTTACC GTCCTGGGCG
CAGCGTTTAC CGCTGGCCGA ACAAGGCCTG GCGTGGTTAA TGCCAACAGT GGTGATGGTG
GTTCTGGCCA TTATCTGGGA TCGCGCGGCA GGTCGTCAGG TGACCTCCAG CGCTCACTAA
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| Protein sequence | MTHQLRSRDI IALGFMTFAL FVGAGNIIFP PMVGLQAGEH VWTAAFGFLI TAVGLPVLTV
VALAKVGGGV DSLSTPIGKV AGVLLATVCY LAVGPLFATP RTATVSFEVG IAPLTGDSAL
PLFIYSLVYF AIVILVSLYP GKLLDTVGNF LAPLKIIALV ILSVAAIVWP AGSISTATEA
YQNAAFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVTE ARLLTRYTVW AGLMAGVGLT
LLYLALFRLG SDSASLVDQS ANGAAILHAY VQHTFGGGGS FLLAALIFIA CLVTAVGLTC
ACAEFFAQYV PLSYRTLVFI LGGFSMVVSN LGLSQLIQIS VPVLTAIYPP CIALVVLSFT
RSWWHNSSRV IAPPMFISLL FGILDGIKAS AFSDILPSWA QRLPLAEQGL AWLMPTVVMV
VLAIIWDRAA GRQVTSSAH
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