Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0298 |
Symbol | ddl |
ID | 6272029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 291993 |
End bp | 293087 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641724538 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_001879088 |
Protein GI | 187731227 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAC TGCGGGTAGG AATCGTTTTT GGTGGTAAAT CAGCGGAACA TGAAGTGTCT CTGCAATCGG CAAAAAACAT TGTCGATGCC ATTGATAAAA GTCGCTTCGA CGTTGTGCTG CTGGGCATTG ATAAACAAGG GCAATGGCAC GTCAGCGATG CCAGCAATTA TCTGCTAAAT GCAGACGATC CTGCCCATAT TGCGTTGCGC CCTTCGGCGA CTAGCCTTGC GCAGGTGCCA AGTAAACATG AGCATCAGCT TATCGACGCG CAAAACGGTC AGCCGTTACC GACGGTGGAT GTCATTTTCC CGATTGTCCA CGGTACGCTG GGCGAAGATG GTTCCTTGCA GGGAATGCTG CGGGTCGCCA ATTTACCGTT TGTAGGTTCT GATGTTCTGG CTTCAGCAGC CTGTATGGAT AAAGATGTTA CCAAACGTCT GCTGCGCGAT GCCGGGCTGA ACATTGCGCC ATTTATTACC CTGACGCGCG CCAATCGTCA CAACATTAGT TTTGCCGAAG TGGAGTCTAA ACTGGGGTTA CCACTGTTTG TAAAACCGGC TAATCAGGGC TCTTCTGTTG GTGTCAGCAA AGTAACCAGT GAAGAACAGT ACGCAATTGC CGTCGATCTG GCGTTCGAAT TCGATCATAA AGTGATCGTT GAGCAAGGGA TCAAAGGTCG TGAGATCGAA TGCGCAGTTC TGGGCAACGA CAACCCGCAA GCCAGCACCT GTGGCGAGAT CGTACTCACC AGCGACTTCT ATGCCTACGA CACCAAGTAC ATTGACGAAG ATGGCGCGAA AGTGGTAGTT CCGGCAGCCA TTGCGCCAGA AATCAACGAT AAGATCCGGG CGATTGCCGT TCAGGCTTAT CAAACGTTGG GATGCGCAGG CATGGCGCGT GTAGACGTGT TTTTAACCCC AGAGAACGAA GTGGTGATCA ACGAGATCAA CACACTGCCT GGCTTCACCA ACATCAGTAT GTATCCGAAG CTGTGGCAAG CCAGCGGTCT GGGTTACACC GATCTGATCA CACGTTTGAT TGAGCTGGCG CTGGAGCGTC ACGCTGCGGA TAACGCATTG AAAACCACAA TGTAA
|
Protein sequence | MEKLRVGIVF GGKSAEHEVS LQSAKNIVDA IDKSRFDVVL LGIDKQGQWH VSDASNYLLN ADDPAHIALR PSATSLAQVP SKHEHQLIDA QNGQPLPTVD VIFPIVHGTL GEDGSLQGML RVANLPFVGS DVLASAACMD KDVTKRLLRD AGLNIAPFIT LTRANRHNIS FAEVESKLGL PLFVKPANQG SSVGVSKVTS EEQYAIAVDL AFEFDHKVIV EQGIKGREIE CAVLGNDNPQ ASTCGEIVLT SDFYAYDTKY IDEDGAKVVV PAAIAPEIND KIRAIAVQAY QTLGCAGMAR VDVFLTPENE VVINEINTLP GFTNISMYPK LWQASGLGYT DLITRLIELA LERHAADNAL KTTM
|
| |