Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0238 |
Symbol | phoE |
ID | 6268972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 245159 |
End bp | 246214 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641724485 |
Product | outer membrane phosphoporin protein E |
Protein accession | YP_001879036 |
Protein GI | 187733959 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA GCACTCTGGC ATTAGTGGTG ATGGGCATTG TGGCATCTGC ATCCGTACAG GCCGCAGAAA TATATAACAA AGACGGTAAT AAACTGGATG TCTATGGCAA AGTTAAAGCC ATGCATTATA TGAGTGATAA CGACAGTAAA GATGGCGACC AGAGTTATAT CCGTTTTGGT TTTAAAGGCG AAACACAAAT TAACGATCAA CTGACTGGTT ATGGTCGTTG GGAAGCAGAG TTTGCCGGTA ATAAAGCAGA GAGTGATACT GCACAGCAAA AAACGCGTCT CGCTTTTGCC GGGTTGAAAT ATAAAGATTT GGGTTCTTTC GATTATGGTC GTAAGCTGGG CGCGTTGTAT GACGTGGAAG CCTGGACCGA TATGTTCCCG GAATTTGGTG GCTACTCCTC GGCGCAGACC GACAACTTTA TGACCAAACG CGCCAGCGGT CTGGCGACGT ATCGGAACAC CGACTTCTTC GGCGTTATCG ATGGCCTGAA CTTAACCCTG CAATATCAAG GGAAAAACGA AAACCGCGAC GTTAAAAAGC AAAACGGCGA TGGCTTCGGC ACGTCATTGA CATATGACTT TGGCGGCAGC GATTTCGCCA TTAGTGGGGC CTATACCAAC TCAGATCGCA CCAACGAGCA GAACCTGCAA AGCCGTGGCA CAGGCAAGCG TGCAGAAGCA TGGGCAACAG GTCTGAAATA CGATGCCAAT AATATTTATC TGGCAACTTT CTATTCTGAA ACTCGCAAAA TGACGCCAAT AACTGGCGGC TTTGCCAATA AGACACAGAA CTTTGAAGCG GTCGCTCAAT ACCAGTTTGA CTTTGGTCTG CGTCCATCGC TGGGTTATGT CTTATCGAAA GGGAAAGATA TTGAGGGCAT CGGTGGTGAA GATCTGGTTA ATTATATCGA CGTCGGTGCT ACGTATTATT TCAACAAAAA TATGTCAGCA TTTGTTGATT ATAAAATCAA CCAACTGGAT AGCGATAACA AATTGAATAT TAATAATGAT GATATTGTCG CGATTGGGAT GACGTATCAG TTTTAA
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Protein sequence | MKKSTLALVV MGIVASASVQ AAEIYNKDGN KLDVYGKVKA MHYMSDNDSK DGDQSYIRFG FKGETQINDQ LTGYGRWEAE FAGNKAESDT AQQKTRLAFA GLKYKDLGSF DYGRKLGALY DVEAWTDMFP EFGGYSSAQT DNFMTKRASG LATYRNTDFF GVIDGLNLTL QYQGKNENRD VKKQNGDGFG TSLTYDFGGS DFAISGAYTN SDRTNEQNLQ SRGTGKRAEA WATGLKYDAN NIYLATFYSE TRKMTPITGG FANKTQNFEA VAQYQFDFGL RPSLGYVLSK GKDIEGIGGE DLVNYIDVGA TYYFNKNMSA FVDYKINQLD SDNKLNINND DIVAIGMTYQ F
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