Gene SbBS512_E0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0172 
SymbollpxD 
ID6269865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp187848 
End bp188873 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content53% 
IMG OID641724423 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_001878981 
Protein GI187733476 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000520968 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCAA TTCGACTGGC TGATTTAGCG CAGCAGTTGG ATGCAGAACT ACACGGTGAT 
GGCGATATCG TCATCACCGG CGTTGCGTCC ATGCAATCTG CACAAACAGG TCACATTACG
TTCATGGTTA ACCCAAAATA CCGTGAGCAT TTAGGCTTGT GCCAGGCGTC CGCGGTTGTC
ATGACCCAGG ACGATCTTCC TTTCGCGAAA AGTGCCGCGC TGGTAGTGAA GAATCCCTAC
CTGACTTACG CGCGCATGGC GCAAATTTTA GATACCACGC CGCAGCCCGC GCAGAACATT
GCACCCAGTG CGGTGATCGA CGCGACGGCG AAGCTGGGGA ACAATGTATC GATTGGCGCT
AACGCGGTGA TTGAATCCGG CGTTGAACTG GGCGATAACG TGATTATCGG TGCCGGTTGC
TTCGTAGGTA AAAACAGCAA AATCGGTGCA GGTTCGCGTC TCTGGGCGAA CGTAACCATT
TACCATGAGA TCCAGATCGG TCAGAATTGC CTGATCCAGT CCGGAACAGT GGTAGGCGCA
GACGGCTTTG GTTATGCCAA CGATCGTGGT AACTGGGTTA AGATCCCACA GATTGGTCGC
GTAATTATTG GCGATCGCGT GGAGATCGGT GCCTGCACTA CCATCGATCG CGGCGCGCTG
GATGACACTG TTATTGGCAA TGGCGTGATC ATTGATAACC AGTGCCAGAT TGCACATAAC
GTCGTGATTG GCGACAATAC GGCGGTTGCC GGTGGCGTCA TTATGGCGGG CAGCCTGAAA
ATTGGTCGTT ACTGCATGAT CGGCGGAGCC AGCGTAATCA ACGGGCATAT GGAAATATGC
GACAAAGTGA CGGTTACGGG CATGGGTATG GTGATGCGTC CCATCACTGA ACCAGGCGTC
TATTCCTCAG GCATTCCGCT GCAACCCAAC AAAGTCTGGC GCAAAACCGC TGCACTGGTG
ATGAACATTG ATGACATGAG CAAGCGTCTG AAATCGCTTG AGCGCAAGGT TAATCAACAA
GACTAA
 
Protein sequence
MPSIRLADLA QQLDAELHGD GDIVITGVAS MQSAQTGHIT FMVNPKYREH LGLCQASAVV 
MTQDDLPFAK SAALVVKNPY LTYARMAQIL DTTPQPAQNI APSAVIDATA KLGNNVSIGA
NAVIESGVEL GDNVIIGAGC FVGKNSKIGA GSRLWANVTI YHEIQIGQNC LIQSGTVVGA
DGFGYANDRG NWVKIPQIGR VIIGDRVEIG ACTTIDRGAL DDTVIGNGVI IDNQCQIAHN
VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV
YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KSLERKVNQQ D