Gene SbBS512_E0171 details

Gene Information

• Locus tag: SbBS512_E0171
• Symbol: skp
• ID: 6269616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 187359
• End bp: 187844
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641724422
• Product: periplasmic chaperone
• Protein accession: YP_001878980
• Protein GI: 187734090
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2825] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000000364139
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAGT GGTTATTAGC GGCAGGTCTC GGTTTAGCAC TGGCAACTTC TGCTCAGGCG 
GCTGACAAAA TTGCAATCGT CAATATGGGC AGCCTGTTCC AGCAGGTAGC GCAGAAAACC 
GGTGTTTCTA ACACGCTGGA AAATGAGTTC AAAGGCCGTG CCAGCGAACT GCAGCGTATG 
GAAACCGATC TGCAGGCTAA AATGAAAAAG CTGCAGTCCA TGAAAGCGGG CAGCGATCGC 
ACTAAGCTGG AAAAAGACGT GATGGCTCAG CGCCAGACTT TTGCTCAGAA AGCGCAGGCT 
TTTGAGCAGG ATCGCGCACG TCGTTCCAAC GAAGAACGCG GCAAACTGGT TACTCGTATC 
CAGACTGCTG TGAAATCCGT TGCCAACAGC CAGGATATCG ATCTGGTTGT TGATGCAAAC 
GCCGTTGCTT ACAACAGCAG CGATGTAAAA GACATCACTG CCGACGTACT GAAACAGGTT 
AAATAA 

 

Protein sequence

MKKWLLAAGL GLALATSAQA ADKIAIVNMG SLFQQVAQKT GVSNTLENEF KGRASELQRM 
ETDLQAKMKK LQSMKAGSDR TKLEKDVMAQ RQTFAQKAQA FEQDRARRSN EERGKLVTRI 
QTAVKSVANS QDIDLVVDAN AVAYNSSDVK DITADVLKQV K