Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0162 |
Symbol | rpsB |
ID | 6270083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 176751 |
End bp | 177476 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641724412 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001878970 |
Protein GI | 187733810 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00314588 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACTG TTTCCATGCG CGACATGCTC AAGGCTGGTG TTCACTTCGG TCACCAGACC CGTTACTGGA ACCCGAAAAT GAAGCCGTTC ATCTTCGGTG CGCGTAACAA AGTTCACATC ATCAACCTTG AGAAAACTGT ACCGATGTTC AACGAAGCTC TGGCTGAACT GAACAAGATT GCTTCTCGCA AAGGTAAAAT CCTTTTCGTT GGTACTAAAC GCGCTGCAAG CGAAGCGGTG AAAGACGCTG CTCTGAGCTG CGACCAGTTC TTCGTGAACC ATCGCTGGCT GGGCGGTATG CTGACTAACT GGAAAACCGT TCGTCAGTCC ATCAAACGTC TGAAAGACCT AGAAACTCAG TCTCAGGACG GTACTTTCGA AAAGCTGACC AAGAAAGAAG CGCTGATGCG CACTCGTGAG CTGGAGAAAC TGGAAAACAG CCTGGGCGGT ATCAAAGACA TGGGCGGTCT GCCGGACGCT CTGTTTGTAA TCGATGCTGA CCACGAACAC ATTGCTATCA AAGAAGCAAA CAACCTGGGT ATTCCGGTAT TTGCTATCGT TGATACCAAC TCTGATCCGG ACGGTGTTGA CTTCGTTATC CCGGGTAACG ACGACGCAAT CCGTGCTGTG ACCCTGTACC TGGGCGCTGT TGCTGCAACC GTACGTGAAG GCCGTTCTCA GGATCTGGCT TCCCAGGCGG AAGAAAGCTT CGTAGAAGCT GAGTAA
|
Protein sequence | MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NEALAELNKI ASRKGKILFV GTKRAASEAV KDAALSCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLETQ SQDGTFEKLT KKEALMRTRE LEKLENSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG IPVFAIVDTN SDPDGVDFVI PGNDDAIRAV TLYLGAVAAT VREGRSQDLA SQAEESFVEA E
|
| |