Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0159 |
Symbol | glnD |
ID | 6270321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 172855 |
End bp | 175527 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724409 |
Product | PII uridylyl-transferase |
Protein accession | YP_001878968 |
Protein GI | 187731963 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0691765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCC TTCCAGAACA GTACGCAAAC ACCGCTCTCC CCACCCTGCC CGGTCAACCG CAAAATCCAT GCGTCTGGCC CCGTGATGAA TTAACCGTCG GTGGGATAAA AGCCCATATA GATACTTTCC AGCGTTGGCT GGGTGATGCC TTTGACAATG GGATCTCTGC AGAACAGTTG ATTGAGGCGC GCACCGAGTT TATCGACCAG CTCCTGCAAC GATTATGGAT TGAAGCGGGA TTCAGCCAGA TTGCCGACCT GGCATTGGTC GCCGTCGGTG GCTACGGTCG TGGCGAGCTG CATCCACTTT CTGACATCGA TTTACTGATT TTAAGCCGTA AAAAGCTCCC GGACGATCAG GCGCAAAAAG TGGGCGAGCT GTTAACGCTG CTCTGGGATG TAAAGCTGGA AGTCGGTCAT AGTGTGCGCA CGCTTGAAGA GTGCATGCTG GAAGGGTTAT CGGATTTAAC CGTCGCCACC AATTTAATCG AATCCCGCTT ATTAATTGGC GATGTTGCGC TCTTCCTCGA ACTGCAAAAA CATATTTTTA GCGAAGGATT CTGGCCTTCC GACAAGTTCT ACGCGGCGAA AGTTGAAGAA CAGAACCAGC GCCATCAGCG TTACCACGGC ACCAGCTACA ATCTTGAACC AGACATCAAA AGTAGCCCTG GCGGCTTGCG CGATATCCAC ACTCTGCAAT GGGTGGCCCG CCGTCATTTT GGCGCAACAT CGCTGGATGA AATGGTTGGG TTTGGCTTCT TAACCTCAGC GGAGCGGGCG GAATTAAACG AATGTCTGCA TATACTGTGG CGTATTCGCT TTGCCCTGCA TCTGGTCGTC AGCCGTTACG ATAATCGCCT GTTATTCGAT CGCCAACTTA GCGTCGCTCA GCGTCTGAAT TACAGTGGTG AAGGCAACGA ACCGGTCGAG CGGATGATGA AGGATTACTT CCGCGTTACA CGCCGCGTCA GTGAACTCAA CCAGATGCTG CTGCAACTGT TCGATGAAGC CATCCTCGCC CTTCCTGCCG ACGAAAAACC ACGTCCAATC GACGATGAGT TTCAGCTACG CGGTACGCTA ATCGACCTGC GTGATGAAAC ACTATTTATG CGCCAGCCGG AAGCCATCTT GCGTATGTTC TACACCATGG TGCGCAACAG TGCGATCACC GGCATTTACT CCACCACGCT GCGCCAGTTA CGCCATGCCC GTCGCCATCT GCAACAACCG CTGTGTAATA TTCCGGAAGC ACGAAAACTG TTTTTGAGCA TTCTGCGTCA CCCCGGAGCG GTGCGGCGCG GGCTATTGCC AATGCATCGC CATAGCGTGC TCGGCGCGTA TATGCCGCAA TGGTCGCATA TCGTCGGGCA GATGCAGTTT GATCTGTTCC ACGCCTACAC GGTGGATGAA CATACTATCC GCGTGATGCT GAAACTGGAG AGTTTTGCCA GTGAAGAAAC GCGCCAGCGC CATCCGTTGT GTGTGGACGT CTGGCCGCGC CTGCCGTCAA CTGAGCTGAT TTTCATCGCC GCGCTGTTTC ACGATATCGC CAAAGGACGC GGCGGCGACC ACTCCATTCT CGGTGCTCAG GATGTAGTGC ATTTTGCAGA ACTCCACGGG CTGAACTCAC GCGAAACACA GCTGGTTGCC TGGCTGGTTC GCCAGCACTT GCTGATGTCG GTGACAGCAC AACGCCGCGA TATTCAGGAC CCTGAAGTCA TCAAGCAGTT TGCCGAAGAA GTTCAAACGG AAAATCGTCT GCGCTATCTG GTATGCCTGA CAGTGGCTGA CATTTGCGCC ACCAACGAAA CGCTGTGGAA TAGCTGGAAG CAAAGTCTGT TGCGCGAACT CTATTTTGCC ACCGAAAAGC AGCTACGACG CGGAATGCAA AACACGCCGG ATATGCGCGA ACGGGTTCGC CATCACCAAC TCCAGGCACT GGCACTACTG CGCATGGATA ACATCGACGA AGAGGCGCTG CACCAAATTT GGTCACGCTG TCGTGCTAAC TATTTTGTCC GCCATAGCCC AAATCAACTG GCCTGGCATG CCCGCCATTT ATTACAGCAT GATTTAAGCA AACCACTGGT ATTGCTTAGC CCGCAGGCTA CGCGTGGAGG CACCGAGATT TTTATCTGGA GCCCGGACCG CCCCTATCTG TTTGCCGCCG TCTGTGCCGA ATTAGACCGC CGCAATTTAA GTGTTCACGA CGCACAAATT TTCACCACTC GCGACGGTAT GGCGATGGAT ACCTTTATCG TGCTGGAACC CGATGGCAAC CCGCTGTCCG CAGATCGTCA TGAGGTTATT CGGTTTGGTC TGGAGCAAGT ACTGACGCAA AGTAGCTGGC AGCCACCGCA GCCCCGTCGC CAACCCGCCA AATTACGCCA TTTTACTGTT GAAACCGAAG TAACGTTTTT GCCGACCCAT ACCGACCGCA AATCGTTCCT TGAGCTTATC GCGCTCGACC AGCCAGGACT GCTGGCGAGA GTCGGGAAAA TTTTTGCCGA TCTGGGAATT TCGCTTCATG GTGCCCGAAT TACAACCATT GGCGAGCGAG TAGAAGATTT ATTCATAATT GCCACCGCTG ACCGGCGTGC GCTTAATAAC GAGTTGCAGC AGGAAGTGCA TCAGCGGTTG ACAGAGGCCC TCAATCCAAA CGATAAAGGG TGA
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Protein sequence | MNTLPEQYAN TALPTLPGQP QNPCVWPRDE LTVGGIKAHI DTFQRWLGDA FDNGISAEQL IEARTEFIDQ LLQRLWIEAG FSQIADLALV AVGGYGRGEL HPLSDIDLLI LSRKKLPDDQ AQKVGELLTL LWDVKLEVGH SVRTLEECML EGLSDLTVAT NLIESRLLIG DVALFLELQK HIFSEGFWPS DKFYAAKVEE QNQRHQRYHG TSYNLEPDIK SSPGGLRDIH TLQWVARRHF GATSLDEMVG FGFLTSAERA ELNECLHILW RIRFALHLVV SRYDNRLLFD RQLSVAQRLN YSGEGNEPVE RMMKDYFRVT RRVSELNQML LQLFDEAILA LPADEKPRPI DDEFQLRGTL IDLRDETLFM RQPEAILRMF YTMVRNSAIT GIYSTTLRQL RHARRHLQQP LCNIPEARKL FLSILRHPGA VRRGLLPMHR HSVLGAYMPQ WSHIVGQMQF DLFHAYTVDE HTIRVMLKLE SFASEETRQR HPLCVDVWPR LPSTELIFIA ALFHDIAKGR GGDHSILGAQ DVVHFAELHG LNSRETQLVA WLVRQHLLMS VTAQRRDIQD PEVIKQFAEE VQTENRLRYL VCLTVADICA TNETLWNSWK QSLLRELYFA TEKQLRRGMQ NTPDMRERVR HHQLQALALL RMDNIDEEAL HQIWSRCRAN YFVRHSPNQL AWHARHLLQH DLSKPLVLLS PQATRGGTEI FIWSPDRPYL FAAVCAELDR RNLSVHDAQI FTTRDGMAMD TFIVLEPDGN PLSADRHEVI RFGLEQVLTQ SSWQPPQPRR QPAKLRHFTV ETEVTFLPTH TDRKSFLELI ALDQPGLLAR VGKIFADLGI SLHGARITTI GERVEDLFII ATADRRALNN ELQQEVHQRL TEALNPNDKG
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