| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0158 |
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| Symbol | dapD |
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| ID | 6270433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 172000 |
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| End bp | 172824 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641724408 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001878967 |
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| Protein GI | 187730436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGT TACAGAACAT TATTGAAACC GCTTTTGAAC GCCGTGCCGA GATCACGCCA
GCCAACGCAG ACACCGTTAC CCGCGAAGCG GTAAATCAGG TGATCTCCCT GCTGGATTCC
GGTGCACTGC GTGTAGCGGA AAAAATTGAC GGTCAGTGGG TGACGCATCA GTGGTTGAAA
AAAGCGGTGC TGCTCTCTTT CCGTATTAAT GATAATCAGG TGATCGAAGG GGCAGAAAGC
CGCTACTTCG ACAAAGTGCC GATGAAATTC GCCGACTACG ACGAAGCACG TTTCCAGAAA
GAAGGCTTCC GCGTTGTGCC ACCAGCGGCG GTACGTCAGG GTGCGTTTAT TGCCCGTAAC
ACCGTGCTGA TGCCGTCTTA CGTCAACATC GGCGCATATG TTGATGAAGG CACCATGGTT
GATACCTGGG CGACCGTCGG TTCTTGTGCG CAGATTGGTA AAAACGTCCA CCTTTCCGGT
GGCGTGGGCA TCGGCGGCGT GCTGGAACCG CTGCAGGCTA ACCCAACCAT CATTGAAGAT
AACTGCTTCA TTGGCGCACG CTCTGAAGTA GTTGAAGGGG TGATTGTCGA AGAAGGTTCC
GTCATTTCCA TGGGCGTATA CATTGGTCAG AGCACCCGTA TTTACGACCG TGAAACCGGC
GAAATCCACT ACGGTCGCGT TCCGGCGGGG TCTGTGGTTG TTTCAGGTAA TCTGCCGTCA
AAAGATGGCA AATACAGCCT CTACTGTGCG GTTATCGTTA AGAAAGTTGA CGCGAAAACT
CGCGGCAAAG TCGGCATTAA CGAACTGCTG CGTACCATCG ACTAA
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| Protein sequence | MQQLQNIIET AFERRAEITP ANADTVTREA VNQVISLLDS GALRVAEKID GQWVTHQWLK
KAVLLSFRIN DNQVIEGAES RYFDKVPMKF ADYDEARFQK EGFRVVPPAA VRQGAFIARN
TVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEV VEGVIVEEGS VISMGVYIGQ STRIYDRETG EIHYGRVPAG SVVVSGNLPS
KDGKYSLYCA VIVKKVDAKT RGKVGINELL RTID
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