| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0154 |
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| Symbol | degP |
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| ID | 6268800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 167764 |
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| End bp | 169188 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641724405 |
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| Product | serine endoprotease |
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| Protein accession | YP_001878964 |
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| Protein GI | 187732326 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CCACATTAGC ACTGAGTGCA CTGGCTCTGA GTTTAGGTTT GGCGTTATCT
CCGCTCTCTG CAACGGCGGC TGAGACTTCT TCAGCAACGA CAGCCCAGCA GATGCCAAGC
CTTGCACCGA TGCTCGAAAA GGTGATGCCT TCAGTGGTCA GCATTAACGT AGAAGGTAGC
ACAACCGTTA ATACGCCGCG TATGCCGCGT AATTTCCAGC AGTTCTTCGG TGATGATTCT
CCGTTCTGCC AGGAAGGTTC TCCGTTCCAG AGCTCTCCGT TCTGCCAGGG TGGCCAGGGC
GGTAATGGTG GCGGCCAGCA ACAGAAATTC ATGGCGCTGG GTTCCGGCGT CATCATTGAT
GCCGATAAAG GCTATGTCGT CACCAACAAC CACGTTGTTG ATAACGCGAC GGTGATTAAA
GTCCAGCTGA GCGATGGCCG TAAGTTCGAC GCGAAGATGG TCGGCAAAGA TCCGCGCTCT
GATATCGCGC TGATCCAAAT CCAGAACCCG AAAAACCTGA CCGCAATTAA GATGGCGGAT
TCTGATGCAC TGCGCGTGGG TGATTACACC GTAGCGATTG GTAACCCGTT TGGTCTGGGC
GAGACGGTAA CTTCCGGGAT TGTCTCTGCG CTGGGGCGTA GCGGCCTGAA TGCTGAAAAC
TACGAAAACT TCATCCAGAC CGATGCAGCG ATCAACCGTG GTAACTCCGG TGGTGCGCTG
GTTAACCTGA ACGGCGAACT GATCGGTATC AACACCGCGA TCCTCGCACC GGACGGCGGC
AACATCGGTA TCGGTTTTGC AATCCCGAGC AACATGGTGA AAAACCTGAC CTCGCAGATG
GTGGAATACG GCCAGGTGAA ACGCGGTGAG CTGGGTATTA TGGGGACTGA GCTGAACTCC
GAACTGGCGA AAGCGATGAA AGTTGACGCC CAGCGCGGTG CTTTCGTAAG CCAGGTTCTG
CCTAATTCCT CCGCTGCAAA AGCGGGCATT AAAGCGGGTG ATGTGATCAC CTCACTGAAC
GGTAAGCCGA TCAGCAGCTT TGCCGCACTG CGTGCTCAGG TGGGTACTAT GCCGGTGGGC
AGCAAACTGA CCCTGGGCTT ACTGCGCGAC GGTAAGCAGG TTAACGTGAA CCTGGAACTG
CAGCAGAGCA GCCAGAATCA GGTTGATTCC AGCTCCATCT TCAACGGCAT TGAAGGCGCT
GAGATGAGCA ACAAAGGCAA AGATCAGGGC GTGGTAGTGA ACAACGTGAA AACGGGCACT
CCGGCTGCGC AGATCGGCCT GAAGAAAGGT GATGTGATTA TTGGCGCGAA CCAGCAGGCA
GTGAAAAACA TCGCTGAACT GCGTAAAGTT CTCGACAGCA AACCGTCTGT GCTGGCACTG
AACATTCAGC GCGGCGACAG CACCATCTAC CTGTTAATGC AGTAA
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| Protein sequence | MKKTTLALSA LALSLGLALS PLSATAAETS SATTAQQMPS LAPMLEKVMP SVVSINVEGS
TTVNTPRMPR NFQQFFGDDS PFCQEGSPFQ SSPFCQGGQG GNGGGQQQKF MALGSGVIID
ADKGYVVTNN HVVDNATVIK VQLSDGRKFD AKMVGKDPRS DIALIQIQNP KNLTAIKMAD
SDALRVGDYT VAIGNPFGLG ETVTSGIVSA LGRSGLNAEN YENFIQTDAA INRGNSGGAL
VNLNGELIGI NTAILAPDGG NIGIGFAIPS NMVKNLTSQM VEYGQVKRGE LGIMGTELNS
ELAKAMKVDA QRGAFVSQVL PNSSAAKAGI KAGDVITSLN GKPISSFAAL RAQVGTMPVG
SKLTLGLLRD GKQVNVNLEL QQSSQNQVDS SSIFNGIEGA EMSNKGKDQG VVVNNVKTGT
PAAQIGLKKG DVIIGANQQA VKNIAELRKV LDSKPSVLAL NIQRGDSTIY LLMQ
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