Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0142 |
Symbol | fhuA |
ID | 6271084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 154542 |
End bp | 156731 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641724395 |
Product | ferrichrome outer membrane transporter |
Protein accession | YP_001878954 |
Protein GI | 187731816 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGTT CCAAAACTGC TCAGCCAAAA CACTCACTGC GTAAAATCGC AGTTGTAGTA GCCACAGCGG TTAGCGGCAT GTCTGTTTAT GCACAGGCAG CGGTTGAACC GAAAGAAGAC ACTATCACCG TTACCGCTGC ACCTGCGCCG CAAGAAAGCC CATGGGGGCC TGCTGCAACT ATTGCGGCGA AGCACTCTGC TACTGCGACT AAAACGGATA CACCAATTGA AAAAACGCCG CAGTCTATTT CGGTTGTGAC AAACGAAGAG ATGCAGATGC ATCAATTTCA GTCTGTAAAA GAAGCATTAG GTTATACACC TGGCGTTACG GTTAGCAGTC GTGGTGCTTC TAATACATAT GATTTTGTTA TCATTCGTGG TTTCTCATCT GTTGGTCTGA ATCAAAATAA TTACCTTGAT GGACTAAAAC TTCAGGGCAA CTTTTATAAC GATGCTGTGA TTGATCCTTA CATGCTCGAG AGGGTTGAAC TGATGCGTGG GCCGACGTCT GTTCTCTATG GAAAAAGTAA TCCTGGTGGG ATTATTTCTA TGGTGAGTAA GCGTCCGACC ACTGAACCCC TGAAAGAAAT TCAGTTTAAA ATGGGGACGG ATAATCTGTT TCAGACCGGA TTCGATTTCA GTGATGCACT GGATGATAAC GGTGAGTTCT CTTACCGTTT GACGGGCCTC GCTCGCTCAA CAAACGAACA GCAGAAAAAC TCTGAATCTC AGCGTTATAC CATTGCTCCA TCATTCTCAT GGCGTCCAGA CGACAAAACC AATTTTACTT TCCTGTCCTA TTTCCAGAAT GAACCAGAAA CGGGTTATTA CGGTTGGTTG CCGAAAGAGG GGACCGTTGA GCCATTGCCT AATGGTAAGC GTCTACCGAC TGACTTCAAT GAAGGTGCAT CGAATAATAC ATACTCCCGT AACCAGAAAA TGGTGGGATA TAGTTTTGAA CATGGTTTTA ATGACACCTT CACCGTGCGT CAGAATCTGC GTTTCAGTGA AATGAAAACC TCACAGAAAA GTGTTTATGG CACAGGGATT GCTGGTGATG GTCATACCCT AAACCGCGGG ACAGTGGTGG ATAATGAGCG TCTACAAAAC TTTAGCGTTG ATACCCAACT TGAAAGTAAG TTTGCTACAG GTGACGTCGA GCATACTTTG CTGACAGGGG TAGACTTCAT GCGGATGCGT AATGATATCA ATGCCAGCTT TGGATCCGCA CCATCCATCG ATCTTTATAA CAAATATCAC CCTGAATACT TTGCATTTGG TAGCGCAGAG CCATACCAGA TGAATGAAAG CAAACAAACA GGTATTTATG TTCAGGATCA GGCGGAATGG AATAAATGGG TATTCACTCT GGGGGGACGC TACGATTGGT CTAAGCAAGC GACCACTGTT CGTGAAAACT CTTATACGCC GACTGAAGGT TATATTGAGC GCAATGATCA TCAGTTCACC TGGCGCGGTG GTGTAAATTA CTTATTCGAT AATGGTATTT CACCTTACTT TAGCTATAGC CAGTCCTTTG AACCGAGTGC TTTCGATCTG TGGAGCAACC CACGCATTTC CTATAAGCCA TCGAAAGGTG AACAGTATGA AGCTGGCGTA AAATATGTTC CGAATGATAT GCCGGTCGTT GTTACGGGCG CAGTCTATCA ATTGACGAAA ACAAATAACC TGACAGCAGA CCCAACAAAC CCATTAGCGC AAGTCCCAGC AGGTGAGATT CGCGCTCGTG GTGTGGAACT TGAAGCAAAA GCGGCGTTAA ATGCCAATAT TAACTTGACG GCTTCTTATA CCTACACCGA TGCGGAATAC ACCAAAGACA CCAATCTCAA AGGTAAAACT CCAGAACAAG TACCGGAGCA TATGGCATCT CTCTGGGGGG ATTATACCTT CAATGAAGGG CCGCTTTCTG GTTTAACATT GGGAACAGGT GGTCGTTTTA TTGGTTCCAG CTATGGTGAT CCGGCAAACA CTTTTAAAGT GGGTAGCGCA GCTGTAATGG ATGCTGTTGT AAAATATGAT CTGGCACGCT TTGGTATGGC GGGATCCAGC CTTGCTGTGA ACGTCAACAA TTTGCTCGAT CGTGAGTATG TTGCCAGTTG CTTCCAGACT TATGGCTGCT TCTGGGGCGC AGAACGTCAG GTCGTTGCAA CCGCAACCTT CCGTTTCTAA
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Protein sequence | MARSKTAQPK HSLRKIAVVV ATAVSGMSVY AQAAVEPKED TITVTAAPAP QESPWGPAAT IAAKHSATAT KTDTPIEKTP QSISVVTNEE MQMHQFQSVK EALGYTPGVT VSSRGASNTY DFVIIRGFSS VGLNQNNYLD GLKLQGNFYN DAVIDPYMLE RVELMRGPTS VLYGKSNPGG IISMVSKRPT TEPLKEIQFK MGTDNLFQTG FDFSDALDDN GEFSYRLTGL ARSTNEQQKN SESQRYTIAP SFSWRPDDKT NFTFLSYFQN EPETGYYGWL PKEGTVEPLP NGKRLPTDFN EGASNNTYSR NQKMVGYSFE HGFNDTFTVR QNLRFSEMKT SQKSVYGTGI AGDGHTLNRG TVVDNERLQN FSVDTQLESK FATGDVEHTL LTGVDFMRMR NDINASFGSA PSIDLYNKYH PEYFAFGSAE PYQMNESKQT GIYVQDQAEW NKWVFTLGGR YDWSKQATTV RENSYTPTEG YIERNDHQFT WRGGVNYLFD NGISPYFSYS QSFEPSAFDL WSNPRISYKP SKGEQYEAGV KYVPNDMPVV VTGAVYQLTK TNNLTADPTN PLAQVPAGEI RARGVELEAK AALNANINLT ASYTYTDAEY TKDTNLKGKT PEQVPEHMAS LWGDYTFNEG PLSGLTLGTG GRFIGSSYGD PANTFKVGSA AVMDAVVKYD LARFGMAGSS LAVNVNNLLD REYVASCFQT YGCFWGAERQ VVATATFRF
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