Gene SbBS512_E0136 details

Gene Information

• Locus tag: SbBS512_E0136
• Symbol: dksA
• ID: 6268971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 147219
• End bp: 147674
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641724389
• Product: RNA polymerase-binding transcription factor
• Protein accession: YP_001878948
• Protein GI: 187733763
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000300013
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAG GGCAAAACCG TAAAACATCG TCCCTGAGTA TTCTCGCCAT CGCTGGGGTG 
GAACCATATC AGGAGAAGCC GGGCGAAGAG TATATGAATG AAGCCCAGCT GGCGCACTTC 
CGTCGTATTC TGGAAGCATG GCGTAATCAA CTCAGGGATG AAGTCGATCG CACCGTTACA 
CATATGCAGG ATGAAGCAGC CAACTTCCCG GACCCGGTAG ACCGTGCAGC CCAGGAAGAA 
GAGTTCAGCC TCGAACTGCG TAACCGCGAT CGCGAGCGTA AGCTGATCAA AAAGATCGAG 
AAGACGCTGA AAAAAGTGGA AGACGAAGAT TTCGGCTACT GCGAATCCTG CGGTGTTGAA 
ATTGGTATTC GCCGTCTGGA AGCGCGCCCG ACAGCCGATC TGTGCATCGA CTGCAAAACG 
CTGGCTGAAA TTCGCGAAAA ACAGATGGCT GGCTAA 

 

Protein sequence

MQEGQNRKTS SLSILAIAGV EPYQEKPGEE YMNEAQLAHF RRILEAWRNQ LRDEVDRTVT 
HMQDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIE KTLKKVEDED FGYCESCGVE 
IGIRRLEARP TADLCIDCKT LAEIREKQMA G