Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0079 |
Symbol | murF |
ID | 6272331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 85619 |
End bp | 86977 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641724337 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_001878896 |
Protein GI | 187733976 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGCG TAACCCTTAG CCAACTTACC GACATTCTCA ACGGTGAACT GCAAGGTGCA GATATCACCC TTGATGCTGT AACCACTGAT ACCCGAAAAC TGACGCCGGG CTGCCTGTTT GTTGCCCTGA AAGGAGAACG TTTTGATGCC CACGATTTTG CCGACCAGGC GAAAGCTGGC GGCGCGGGCG CACTACTAGT CAGCCGTCCG CTGGATATCG ACCTGCCGCA GTTAATCGTC AAGGATACGC GTCTGGCGTT TGGTGAACTG GCTGCATGGG TTCGCCAGCA AGTTCCGGCG CGCGTGGTTG CTCTGACAGG TTCCTCCGGC AAAACCTCCG TTAAAGAGAT GACGGCGGCG ATTTTAAGCC AGTGCGGCAA CACGCTTTAT ACGGCAGGCA ATCTCAACAA CGACATCGGT GTACCGATGA CGTTGTTGCG CTTAACGCCG GAATACGATT ACGCAGTTAT TGAACTTGGC GCGAACCATC AGGGCGAAAT AGCCTGGACT GTGAGTCTGA CTCGCCCGGA AGCTGCGCTG GTCAACAACC TGGCAGCGGC GCATCTGGAA GGTTTTGGCT CGCTTGCGGG TGTCGCGAAA GCGAAAGGTG AAATCTTTAG CGGCCTGCCG GAAAACGGTA TCGCCATTAT GAACGCCGAC AACAACGACT GGCTGAACTG GCAGAGCGTA ATTGGCTCAC GCAAAGTGTG GCGTTTCTCA CCCAATGCCG CCAACAGCGA TTTCACCGCC ACCAATATCC ATGTGACCTC GCACGGTACG GAATTTACCC TACAAACCCC AACCGGTAGC GTCGATGTTC TGCTGCCGTT GCCGGGGCGT CACAATATTG CGAATGCGCT GGCAGCCGCT GCGCTCTCCA TGTCCGTGGG CGCAACGCTT GATGCTATCA AAGCGGGGCT GGCAAATCTG AAAGCTGTTC CAGGCCGTCT GTTCCCCATC CAACTGGCAG AAAACCAGTT GCTGCTCGAC GACTCCTACA ACGCCAATGT CGGTTCAATG ACCGCCGCTG TTCAGGTACT GGCTGAAATG CCGGGCTACC GCGTGCTGGT GGTGGGCGAT ATGGCGGAAC TGGGCGCTGA AAGCGAAGCC TGCCATGTAC AGGTGGGCGA GGCGGCAAAA GCTGCTGGTA TTGACCGCGT GTTAAGCGTG GGTAAACAAA GCCATGCTAT CAGCACCGCC AGCGGCGTTG GCGAACATTT TGCTGATAAA ACTGCGTTAA TTACGCGTCT TAAATCACTG ATTGCTGAGC AACAGGTAAT TACGATTTTA GTTAAGGGTT CACGTAGTGC CGCCATGGAA GAGGTAGTAC GCGCTTTACA GGAGAATGGG ACATGTTAG
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Protein sequence | MISVTLSQLT DILNGELQGA DITLDAVTTD TRKLTPGCLF VALKGERFDA HDFADQAKAG GAGALLVSRP LDIDLPQLIV KDTRLAFGEL AAWVRQQVPA RVVALTGSSG KTSVKEMTAA ILSQCGNTLY TAGNLNNDIG VPMTLLRLTP EYDYAVIELG ANHQGEIAWT VSLTRPEAAL VNNLAAAHLE GFGSLAGVAK AKGEIFSGLP ENGIAIMNAD NNDWLNWQSV IGSRKVWRFS PNAANSDFTA TNIHVTSHGT EFTLQTPTGS VDVLLPLPGR HNIANALAAA ALSMSVGATL DAIKAGLANL KAVPGRLFPI QLAENQLLLD DSYNANVGSM TAAVQVLAEM PGYRVLVVGD MAELGAESEA CHVQVGEAAK AAGIDRVLSV GKQSHAISTA SGVGEHFADK TALITRLKSL IAEQQVITIL VKGSRSAAME EVVRALQENG TC
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