Gene SbBS512_E0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0067 
SymbolleuB 
ID6268380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp71835 
End bp72926 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content55% 
IMG OID641724326 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001878885 
Protein GI187730608 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGA ATTACCATAT TGCCGTATTG CCGGGGGACG GTATTGGTCC GGAAGTGATG 
ACCCAGGCGC TGAAAGTGCT GGATGCCGTG CGCAACCGCT TTGCGATGCG CATCACCACC 
AGCCATTACG ATGTAGGCGG CGCAGCCATT GATAACCACG GGCAACCACT GCCGCCTGCG 
ACGGTTGAAG GTTGTGAGCA AGCCGATGCC GTGCTGTTTG GCTCGGTAGG CGGTCCGAAA 
TGGGAACATT TACCACCAGA CCAGCAACCA GAACGCGGCG CGCTGTTGCC TTTGCGTAAG 
CACTTCAAAT TATTCAGCAA CCTGCGTCCG GCAAAACTGT ATCAGGGGCT GGAAGCATTC 
TGTCCGCTGC GTGCTGACAT TGCCGCTAAC GGCTTCGACA TCCTGTGCGT GCGCGAACTG 
ACCGGCGGCA TCTATTTCGG TCAGCCAAAA GGCCGCGAAG GTAGCGGACA GTATGAAAAA 
GCGTTTGATA CCGAGGTGTA TCACCGTTTT GAGATCGAAC GTATCGCCCG CATCGCGTTT 
GAATCTGCCC GCAAGCGTCG CCACAAAGTC ACCTCAATCG ACAAAGCCAA CGTGCTGCAA 
TCCTCTATTT TATGGCGGGA GATCGTTAAC GAGATCGCCA CGGAATACCC GGATGTCGAA 
CTGGCGCATA TGTACATCGA CAACGCCACC ATGCAGCTGA TTAAAGATCC ATCACAGTTT 
GACGTCCTGC TGTGCTCCAA CCTGTTTGGC GACATTCTGT CTGACGAGTG CGCAATGATC 
ACTGGCTCGA TGGGGATGTT GCCTTCCGCC AGCCTGAACG AGCAAGGTTT TGGTCTGTAT 
GAACCGGCAG GCGGCTCAGC ACCAGATATC ACAGGCAAAA ACATCGCCAA CCCGATTGCG 
CAAATTCTGT CGCTGGCACT GCTGCTGCGC TACAGCCTGG ATGCCGATGA TGCGGCTTGC 
GCCATTGAAC GCGCCATTAA CCGCGCATTA GAAGAAGGCA TTCGCACCGG GGATTTAGCC 
CGTGGCGCTG CCGCCGTTAG TACCGATGAA ATGGGCGATA TCATTGCCCG CTATGTGGCA 
GAAGGGGTGT AA
 
Protein sequence
MSKNYHIAVL PGDGIGPEVM TQALKVLDAV RNRFAMRITT SHYDVGGAAI DNHGQPLPPA 
TVEGCEQADA VLFGSVGGPK WEHLPPDQQP ERGALLPLRK HFKLFSNLRP AKLYQGLEAF 
CPLRADIAAN GFDILCVREL TGGIYFGQPK GREGSGQYEK AFDTEVYHRF EIERIARIAF 
ESARKRRHKV TSIDKANVLQ SSILWREIVN EIATEYPDVE LAHMYIDNAT MQLIKDPSQF 
DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI TGKNIANPIA 
QILSLALLLR YSLDADDAAC AIERAINRAL EEGIRTGDLA RGAAAVSTDE MGDIIARYVA 
EGV