| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0062 |
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| Symbol | sgrR |
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| ID | 6270934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 66708 |
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| End bp | 68363 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641724321 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_001878881 |
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| Protein GI | 187733549 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCTG CTCGTCTGCA ACAACAGTTC ATCCGCCTGT GGCAATGCTG CGAGGGTAAA
TCGCAGGACA CAACGCTCAA CGAACTGGCA GCGTTATTGA GCTGCTCGCG TCGTCATATG
CGTACCCTGC TCAACACCAT GCAGGATCGC GGCTGGCTGA CGTGGGAAGC GGAAGTCGGG
CGCGGTAAAC GCTCGCGTCT GACATTCCTC TATACCGGGC TGGCGCTTCA GCAACAGCGG
GCGGAAGACC TGCTGGAGCA GGATCGTATC GACCAACTAG TGCAGTTGGT TGGCGACAAA
GCGACTGTGC GGCAAATGCT GGTTTCTCAT CTGGGCCGCA GCTTCCGCCA GGGGCGGCAC
ATCCTGCGCG TGCTCTACTA TCGTCCGTTG CGTAATCTGC TACCTGGCAG CGCATTGCGC
CGTTCCGAAA CCCATATTGC CCGGCAAATC TTCAGTTCGC TAACGCGCAT AAATGAGGAA
AATGGGGAAC TGGAAGCAGA CATCGCCCAC CACTGGCAGC AAATATCACC GCTTCACTGG
CGTTTCTTTT TGCGTCCAGG AGTCCATTTT CATCATGGTC GTGAACTGGA AATGGACGAC
GTGATCGCCT CTTTAAAACG AATCAATACG CTGCCGCTCT ATTCGCATAT TGCGGACATT
GTGTCGCCGA CGCCCTGGAC GCTGGATATC CATCTCACGC AACCGGACCG CTGGTTACCG
TTACTGCTGG GGCAAGTTCC GGCGATGATC CTGCCGCGCG AATGGGAAAC CCTCAGTAAC
TTTGCCAGCC ATCCCATCGG CACCGGTCCG TATGCGGTGA TCCGCAACAC CACCAATCAA
CTGAAAATTC AGGCATTCGA TGACTTCTTC GGTTACCGGG CATTAATCGA TGAAGTTAAC
GTCTGGGTTC TGCCGGAAAT TGCCGACGAG CCAGCTGGAG GTCTGATGCT AAAAGGTCCA
CAGGGTGAGG AAAAAGAGAT TGAAAGCCGC CTGGAGGAAG GTTGCTACTA TTTACTATTC
GACAGCCGCA CCCATCGCGG AGCGAATCAG CAAGTCAGGG ACTGGGTAAG CTATGTGCTT
TCTCCAACTA ATCTGGTCTA TTTCGCTGAG GAACAGTACC AGCAACTGTG GTTCCCGGCT
TATGGACTGC TCCCCCGTTG GCACCATGCC CGCACCATAA AGAGCGAAAA ACCGGCTGGC
CTGGAAAGCC TCACCCTGAC CTTTTATCAG GATCACAGTG AGCATCGGGT GATTGCCGGG
ATCATGCAGC AGATTCTGGC AAGTCACCAG GTCACGCTGG AAATCAAAGA GATCAGCTAC
GATCAGTGGC ATGAAGGAGA GATCGAGAGC GATATCTGGC TTAATAGCGC CAACTTTACG
CTGCCGCTGG ATTTTTCGCT GTTCGCGCAC TTGTGCGAGG TGCCGCTGCT CCAACACTGT
ATTCCGATCG ACTGGCAAGC CGACGCCGCC CGCTGGCGCA ATGGCGAAAT GAACCTGGCG
AACTGGTGCC AGCAACTGGT CGCCAGTAAA GCAATGGTGC CGCTTATCCA CCACTGGCTG
ATCATTCAGG GACAACGCAG TATGCGCGGC CTGCGTATGA ATACCCTCGG CTGGTTCGAT
TTTAAATCAG CGTGGTTTGC GCCGCCGGAT CCATGA
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| Protein sequence | MPSARLQQQF IRLWQCCEGK SQDTTLNELA ALLSCSRRHM RTLLNTMQDR GWLTWEAEVG
RGKRSRLTFL YTGLALQQQR AEDLLEQDRI DQLVQLVGDK ATVRQMLVSH LGRSFRQGRH
ILRVLYYRPL RNLLPGSALR RSETHIARQI FSSLTRINEE NGELEADIAH HWQQISPLHW
RFFLRPGVHF HHGRELEMDD VIASLKRINT LPLYSHIADI VSPTPWTLDI HLTQPDRWLP
LLLGQVPAMI LPREWETLSN FASHPIGTGP YAVIRNTTNQ LKIQAFDDFF GYRALIDEVN
VWVLPEIADE PAGGLMLKGP QGEEKEIESR LEEGCYYLLF DSRTHRGANQ QVRDWVSYVL
SPTNLVYFAE EQYQQLWFPA YGLLPRWHHA RTIKSEKPAG LESLTLTFYQ DHSEHRVIAG
IMQQILASHQ VTLEIKEISY DQWHEGEIES DIWLNSANFT LPLDFSLFAH LCEVPLLQHC
IPIDWQADAA RWRNGEMNLA NWCQQLVASK AMVPLIHHWL IIQGQRSMRG LRMNTLGWFD
FKSAWFAPPD P
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