Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0060 |
Symbol | tbpA |
ID | 6272093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 65561 |
End bp | 66544 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724319 |
Product | thiamine transporter substrate binding subunit |
Protein accession | YP_001878879 |
Protein GI | 187730746 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAAAA AATGTCTTCC CCTGCTGTTG CTGTGCACAG CGCCCGTTTT CGCTAAACCC GTTCTGACTG TTTATACCTA CGATTCCTTC GCCGCCGACT GGGGGCCTGG TCCAAAGATC AAAAAAGCTT TTGAAGCCGA CTGTAACTGC GAACTGAAAC TGGTGGCGCT GGAAGATGGC GTTTCGCTTC TCAACCGTCT ACGGATGGAA GGCAAAAATA GTAAAGCCGA TGTGGTGCTG GGGCTGGATA ACAATCTGTT AGACGCCGCC AGTAAAACCG GACTATTTGC CAAAAGCGGT GTGGCAGCGG ATGCCGTTAA CGTTCCCGGC GGCTGGAATA ATGACACTTT CGTCCCGTTT GATTACGGCT ATTTCGCCTT CGTCTATGAC AAGAACAAAC TGAAAAACCC GCCGCAAAGC CTGAAAGAAT TGGTTGAGAG CGATCAAAAC TGGCGGGTGA TTTATCAGGA TCCGCGCACC AGTACGCCGG GGCTGGGCCT GCTGTTGTGG ATGCAAAAAG TCTATGGCGA TGACGCCCCA CAAGCCTGGC AAAAACTGGC GAAGAAAACC GTCACGGTCA CCAAAGGCTG GAGCGAAGCC TACGGCCTGT TTTTAAAAGG TGAAAGCGAT CTGGTACTGA GTTACACCAC CTCTCCGGCT TATCACATTC TCGAAGAGAA AAAAGATAAC TACGCCGCCG CGAACTTTAG CGAAGGTCAC TATCTGCAGG TGGAAGTCGC CGCCCGCACC GCTGCCAGCA AGCAGCCGGA GCTGGCGCAA AAATTCCTCC AGTTTATGGT TTCTCCGGCT TTTCAGAATG CGATCCCAAC CGGTAACTGG ATGTATCCGG TGGCAAATGT CACGCTGCCT GCCGGGTTTG AACAATTGAC CAAACCGGCC ACCACGCTGG AGTTCACACC AGCTGAAGTG GCGGCACAAC GTCAGGCATG GATTAGCGGA TGGCAACGCG CCGTCAGCCG TTAA
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Protein sequence | MLKKCLPLLL LCTAPVFAKP VLTVYTYDSF AADWGPGPKI KKAFEADCNC ELKLVALEDG VSLLNRLRME GKNSKADVVL GLDNNLLDAA SKTGLFAKSG VAADAVNVPG GWNNDTFVPF DYGYFAFVYD KNKLKNPPQS LKELVESDQN WRVIYQDPRT STPGLGLLLW MQKVYGDDAP QAWQKLAKKT VTVTKGWSEA YGLFLKGESD LVLSYTTSPA YHILEEKKDN YAAANFSEGH YLQVEVAART AASKQPELAQ KFLQFMVSPA FQNAIPTGNW MYPVANVTLP AGFEQLTKPA TTLEFTPAEV AAQRQAWISG WQRAVSR
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