Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0043 |
Symbol | apaH |
ID | 6270312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 42921 |
End bp | 43763 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641724302 |
Product | diadenosine tetraphosphatase |
Protein accession | YP_001878862 |
Protein GI | 187731973 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAT ACCTTATTGG CGACGTTCAT GGTTGTTACG ATGAACTGAT CGCATTGCTG CATAAAGTAG AATTTACCCC TGGGAAAGAT ACCCTCTGGC TGACGGGCGA TCTGGTCGCG CGCGGCCCGG GTTCGCTGGA TGTTCTGCGC TATGTGAAAT CCTTAGGCGA CAGCGTACGT CTGGTGCTGG GCAATCACGA TCTGCATCTG CTGGCGGTAT TTGCCGGGAT CAGCCGCAAT AAACCGAAAG ATCGCCTGAC ACCGCTGCTG GAAGCGCCGG ATGCCGACGA GCTGCTTAAC TGGCTGCGTC GCCAGCCTTT GCTGCAAATC GACGAAGAGA AAAAGTTGGT GATGGCCCAC GCAGGGATCA CGCCGCAGTG GGATCTACAG ACCGCCAAAG AGTGCGCGCG CGATGTAGAA GCGGTGCTAT CGAGTGACTC CTATCCCTTC TTTCTCGACG CTATGTACGG CGATATGCCA AATAACTGGT CACCGGAATT GCGGGGGCTG GGAAGACTGC GTTTTATCAC CAACGCCTTT ACCCGTATGC GTTTTTGCTT CCCGAACGGT CAACTGGATA TGTACAGCAA AGAATCGCCG GAAGAGGCCC CTGCCCCACT GAAACCGTGG TTTGCGATTC CTGGCCCTGT CGCTGAAGAA TACAGCATCG CCTTTGGTCA TTGGGCATCG CTGGAGGGCA AAGGTACGCC GGAAGGTATA TACGCGCTGG ATACCGGCTG CTGCTGGGGT GGTACATTAA CCTGCCTGCG CTGGGAAGAT AAACAGTATT TTGTCCAGCC GTCGAACCGG CATAAGGATT TGGGCGAAGC GGCGGCGTCT TAA
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Protein sequence | MATYLIGDVH GCYDELIALL HKVEFTPGKD TLWLTGDLVA RGPGSLDVLR YVKSLGDSVR LVLGNHDLHL LAVFAGISRN KPKDRLTPLL EAPDADELLN WLRRQPLLQI DEEKKLVMAH AGITPQWDLQ TAKECARDVE AVLSSDSYPF FLDAMYGDMP NNWSPELRGL GRLRFITNAF TRMRFCFPNG QLDMYSKESP EEAPAPLKPW FAIPGPVAEE YSIAFGHWAS LEGKGTPEGI YALDTGCCWG GTLTCLRWED KQYFVQPSNR HKDLGEAAAS
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