| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0027 |
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| Symbol | rpsT |
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| ID | 6271161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 24395 |
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| End bp | 24658 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641724287 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_001878847 |
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| Protein GI | 187731624 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000024189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTAATA TCAAATCAGC TAAGAAGCGC GCCATTCAGT CTGAAAAGGC TCGTAAGCAC
AACGCAAGCC GTCGCTCTAT GATGCGTACT TTCATCAAGA AAGTATACGC AGCTATCGAA
GCTGGCGACA AAGCTGCTGC ACAGAAAGCA TTTAACGAAA TGCAACCGAT CGTGGACCGT
CAGGCTGCTA AAGGTCTGAT CCACAAAAAC AAAGCTGCAC GTCATAAGGC TAACCTGACT
GCACAGATCA ACAAACTGGC TTAA
|
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| Protein sequence | MANIKSAKKR AIQSEKARKH NASRRSMMRT FIKKVYAAIE AGDKAAAQKA FNEMQPIVDR
QAAKGLIHKN KAARHKANLT AQINKLA
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