Gene SbBS512_0008 details

Gene Information

• Locus tag: SbBS512_0008
• ID: 6268350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010657
• Strand: +
• Start bp: 5821
• End bp: 6480
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641724216
• Product: plasmid partition protein A, putative
• Protein accession: YP_001878776
• Protein GI: 187729976
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG1192] ATPases involved in chromosome partitioning

Plasmid Coverage information

• Num covering plasmid clones: 89
• Plasmid unclonability p-value: 0.0000000745248
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA TCATTACAGT TGCAGGGCAT AAAGGCGGCA TAGGCAAAAG CACCGTGCTT 
TGTTCCTTAT GTGTCTGTGC CATCAGGAAA GGGAAAACAG CCTGTTTCCT GGAAACAGAC 
TCGCAGGGAA GCATCAAGGA CTTCATTGAG GAACGTAAAA CCAACGAGCG GCTGTCTGAA 
ATACCGTATT TCGAGTGCTA CACAGATATT CCGGCGATGG CACGAAAACT GGCTGCCCGC 
TTTGATTATG TGTTTGTTGA TACGCCAGGA ATGAAATCTC CGGCCTTCGT TAAGGCACTG 
AGTTGTGCTG ACATTCTGTT CACATTCATT GAGCCAGGAG CAGGCATCGA GATCAACACG 
CTGGGACGGC TGGTTTTCGA CATTAAAACA GCACAGGCCG GAGTCAATCC ATCAATGAAA 
GCATGGATTG TCCTGAATAA GTGTTCAACT AATCCGTCAG ACAGTGAAGC GTCAGAACTG 
CGCCGACAAC TCAATGATGA TCCTGACTGG CTTCCGGTTC CCCGCCAGCG TATCTATATG 
CGTACTGCGC ATAAAAAAGC CTATAACAGT GGTATGGGCG TACACGAATA CGATGATAAA 
CGGGGAAACA AAGCCCGTGG AGAGATTGAA TTACTGTTAA AAGAAACGGA TGTTCTGTAA 

 

Protein sequence

MGKIITVAGH KGGIGKSTVL CSLCVCAIRK GKTACFLETD SQGSIKDFIE ERKTNERLSE 
IPYFECYTDI PAMARKLAAR FDYVFVDTPG MKSPAFVKAL SCADILFTFI EPGAGIEINT 
LGRLVFDIKT AQAGVNPSMK AWIVLNKCST NPSDSEASEL RRQLNDDPDW LPVPRQRIYM 
RTAHKKAYNS GMGVHEYDDK RGNKARGEIE LLLKETDVL