Gene SbBS512_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0006 
Symbol 
ID6268316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand+ 
Start bp3683 
End bp4336 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content41% 
IMG OID641724214 
Productputative lipoprotein 
Protein accessionYP_001878774 
Protein GI187730013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value0.00000000210005 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAT CAAAAAAAGT AGTGGTTATT TTTGTTGCTT TGAGTTCATT CTTGCTGGCA 
GGGTGTGATT CACCAAAAGA TGCTAATAAG CAAAACTTTG AAAAAGCTAT TAATACTCGA 
CTAGAGAAGG AATGCATTAC TATTAGTCCG CTGGGAATGT TTGATAGTAA GCCTTATCCG 
GTTCAGGTAG CTGTGGCTCA GGCTAATCGA TATACATCTC AGGAACGGGC AGATGAAATA 
AATTCTCGAC AGTTTTCTGC GCTGGATGTA CTGGTCAAAG CCGATTTATT AACAGTAAAA 
GATACCCTGG TTGATGACGT TATTGGTTTT ACTAAGACGG GTAAGAAAGT GCCAGGCCGT 
GAATATGCTC TGACAGATGA GGGGAAAAAA TATCTGAAGT CTCCGGAACG GCCTGATTTT 
TGCGTTGGTC ATTATAAGGT GGATGAGATA GTTGATTTTA CCGAACCTGG TGATGCTATG 
GGAATGAAGA TCACGCAGGT GAATTACACA TTCAGTCCCA CCAGTATCGC TGAATGGGCG 
AAACGCGATG ATGTTCGGAC AGCATTTTTA GGACTTGAGT CTGATTTGAA AGAGAAACAA 
ACAAAACGTA TTACACTGGT TTTGAAAAAT GATGGATGGT CTGCTGAACG GTAG
 
Protein sequence
MIKSKKVVVI FVALSSFLLA GCDSPKDANK QNFEKAINTR LEKECITISP LGMFDSKPYP 
VQVAVAQANR YTSQERADEI NSRQFSALDV LVKADLLTVK DTLVDDVIGF TKTGKKVPGR 
EYALTDEGKK YLKSPERPDF CVGHYKVDEI VDFTEPGDAM GMKITQVNYT FSPTSIAEWA 
KRDDVRTAFL GLESDLKEKQ TKRITLVLKN DGWSAER