Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2155 |
Symbol | |
ID | 6273723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2627640 |
End bp | 2628326 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642614216 |
Product | hypothetical protein |
Protein accession | YP_001878744 |
Protein GI | 187736632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.541096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00429622 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCAAAAT ATATAATAAT TCCTATTATT TTCACATCAA CAATAGTTTA TGGAGATAAT CAAAAATTTA ATGAATATGC AATTTTTTGC GAAAAAATGA TTGTCACATT GCAGAGCTGC ACGGATGAAA AATCCACTTT TTCACACTCT TCCGAATTTC CTATTATTTT ATATACTGTT TTAAATGAAA ATCCTTTGAA AGATTTTTTT AAATCTCAAA AGGGAGCTTT ATATCATATT ATGCTATTGG CGGAGATAGA AAGATTGAAC CATCACAAAT GGTTCAATCT TTCCTCTATG AAAAATCATG TTAATCAAAT AAAATCAAAA AATACCTTAT GCAACGGCAT AGAGGATCCA AGTTCTGCTG TTTCCGCCAA GGAAAAAATT ATTAATTACG TAAATAATTT AAATGATAAT AAATCAGATG TACTCTATTT AATTTCATAT TTATTGGATA TATACAAAAT TAATGATTTG GAATTGTTTA TGAAAATCAT GTCGATATCA GATTGCGAAT TGCTCAAAAA AATAGATATG ATAGAAAAAA AGATTGGTTC TTTACAAATT AATCATCTGG AACGGACGAC AATCAAACAT TTGATAAAAG AAATTCAAAA CAAATATAAA ATACATGAAA ATATTTATAA TGAATTAAGA AAAAAATTAA ACAGTAACAT AGATTGA
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Protein sequence | MSKYIIIPII FTSTIVYGDN QKFNEYAIFC EKMIVTLQSC TDEKSTFSHS SEFPIILYTV LNENPLKDFF KSQKGALYHI MLLAEIERLN HHKWFNLSSM KNHVNQIKSK NTLCNGIEDP SSAVSAKEKI INYVNNLNDN KSDVLYLISY LLDIYKINDL ELFMKIMSIS DCELLKKIDM IEKKIGSLQI NHLERTTIKH LIKEIQNKYK IHENIYNELR KKLNSNID
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