Gene Amuc_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2155 
Symbol 
ID6273723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2627640 
End bp2628326 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content25% 
IMG OID642614216 
Producthypothetical protein 
Protein accessionYP_001878744 
Protein GI187736632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.541096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00429622 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAAAAT ATATAATAAT TCCTATTATT TTCACATCAA CAATAGTTTA TGGAGATAAT 
CAAAAATTTA ATGAATATGC AATTTTTTGC GAAAAAATGA TTGTCACATT GCAGAGCTGC
ACGGATGAAA AATCCACTTT TTCACACTCT TCCGAATTTC CTATTATTTT ATATACTGTT
TTAAATGAAA ATCCTTTGAA AGATTTTTTT AAATCTCAAA AGGGAGCTTT ATATCATATT
ATGCTATTGG CGGAGATAGA AAGATTGAAC CATCACAAAT GGTTCAATCT TTCCTCTATG
AAAAATCATG TTAATCAAAT AAAATCAAAA AATACCTTAT GCAACGGCAT AGAGGATCCA
AGTTCTGCTG TTTCCGCCAA GGAAAAAATT ATTAATTACG TAAATAATTT AAATGATAAT
AAATCAGATG TACTCTATTT AATTTCATAT TTATTGGATA TATACAAAAT TAATGATTTG
GAATTGTTTA TGAAAATCAT GTCGATATCA GATTGCGAAT TGCTCAAAAA AATAGATATG
ATAGAAAAAA AGATTGGTTC TTTACAAATT AATCATCTGG AACGGACGAC AATCAAACAT
TTGATAAAAG AAATTCAAAA CAAATATAAA ATACATGAAA ATATTTATAA TGAATTAAGA
AAAAAATTAA ACAGTAACAT AGATTGA
 
Protein sequence
MSKYIIIPII FTSTIVYGDN QKFNEYAIFC EKMIVTLQSC TDEKSTFSHS SEFPIILYTV 
LNENPLKDFF KSQKGALYHI MLLAEIERLN HHKWFNLSSM KNHVNQIKSK NTLCNGIEDP
SSAVSAKEKI INYVNNLNDN KSDVLYLISY LLDIYKINDL ELFMKIMSIS DCELLKKIDM
IEKKIGSLQI NHLERTTIKH LIKEIQNKYK IHENIYNELR KKLNSNID