| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2128 |
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| Symbol | |
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| ID | 6274775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2594717 |
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| End bp | 2595913 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642614190 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001878718 |
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| Protein GI | 187736606 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGG CGGAGCAGGC CTCCCTGAAT CATGAGATTT TAAATACATG GCGTCCCGGG
GAAACTCTGG GGGAACACAT GGAGCGCCGC GGCGTCAGCC GGCGCGAATT CAACAAGTGG
TGTCTGAAAA TGATCTCCCT GATGGGCGTT GCCACTGTAA CGGGCGGCAT TTCCAACGCC
CAGGAGATTG CGGACAAGAT GGCCGCATTG AAACGTCCCG TAGTCATCTG GCTCCAGCTT
CAGGAATGCA CCGGATGCCT GGAAAGCACT ATCCGCAGCT ATAACGAGGA AATCGGGGAC
ATGGTGCTTT CCGCCGTCTC CATGCCTTAC GTGGAACTGC TGATGGCCCC TTCAGGAGAG
GCCGCCAATC AGGCTCTGGA AGACGCGATC AGGGAGCCCC ACATCCTCGT CATCAACGGT
TCCGTTCCGG TCAATGACGG CGGGGTGTAC TGCACCGTGG CCGGAGATAC CGTGGAGAAC
ATGCTGCGCC ATTGCGCGGA AAACGCCTCT CATATCCTGG CCGTGGGTTC GTGCGCGTAC
TTCGGCTCCA TCCAGGCCGC CCGTCCCAAC CCCACCGGGG CCGTGGGCAT CCGGGACATC
CTGACGGACC GCACGGTCAT CAACGTGCCC GGCTGCCCGC CCATCGGGGA CGTGATTACG
GCCGTCATCA TGTACATCCT TACATTTGAC CGCGCCCCGG AATGCGACCT GGAGTCGCGC
CCGCTGATGG CATACGGCAC CCGCATCCAC AATAATTGCC CGCGCCGCGC CCATTTCGAC
GCCGGACAGT TCGTCAACGT GTTTGACGAC GAGAACGCGC GGGAATGCTT CTGCCTGTAC
AAGGTGGGCT GCAAGGGCCC GGATACGTTC TCTCCCTGCC CCATCGTCAA ATGGAATGGC
GGCGTCAGCT TCCCCATCCA GTCCGGCCAC CCGTGCATCG GCTGTACGGA GCTGTACTTC
TTTGACCGCA TGACTCCGTT TTACAAGACG CTGCCGAACG TGAACGGCTT CGGCGTGGAA
GCCTCCGCCA ACATCATCGG GGCTGTGGGC GTAGCCGGCG CCGGAGCGGC AATCGCCGCC
CATGCCGTGG GCTCCGCCAT TCATTACAGG AAGCAGCACA TGAAGGAGGA AGCAAACGTC
TCCCTGCCCG CCTTCGGGGA CGCTCCCGGC TCGCCCGACA AGGAAATTGA AGAATAG
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| Protein sequence | MQEAEQASLN HEILNTWRPG ETLGEHMERR GVSRREFNKW CLKMISLMGV ATVTGGISNA
QEIADKMAAL KRPVVIWLQL QECTGCLEST IRSYNEEIGD MVLSAVSMPY VELLMAPSGE
AANQALEDAI REPHILVING SVPVNDGGVY CTVAGDTVEN MLRHCAENAS HILAVGSCAY
FGSIQAARPN PTGAVGIRDI LTDRTVINVP GCPPIGDVIT AVIMYILTFD RAPECDLESR
PLMAYGTRIH NNCPRRAHFD AGQFVNVFDD ENARECFCLY KVGCKGPDTF SPCPIVKWNG
GVSFPIQSGH PCIGCTELYF FDRMTPFYKT LPNVNGFGVE ASANIIGAVG VAGAGAAIAA
HAVGSAIHYR KQHMKEEANV SLPAFGDAPG SPDKEIEE
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