| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2121 |
|---|
| Symbol | |
|---|
| ID | 6273731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2583586 |
|---|
| End bp | 2584158 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642614183 |
|---|
| Product | Aminoacyl-tRNA hydrolase |
|---|
| Protein accession | YP_001878711 |
|---|
| Protein GI | 187736599 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
|---|
| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.062679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCAC CCGTTAAAAT GATCGTGGGC CTGGGCAACC CGGGCAGAAC CTATGAAGAC
ACCCGCCATA ACGCGGGGTT CATGGTGCTT GACCGCCTGG CCGCCCGGTG GGGGGCCGTA
TTCAAGGCGG ACAGGCAGCG CAAGTGCGAG GTGGCCGCCG GCCCCGGCGT CCTGCTGGTG
AAACCCTCCA CGTTCATGAA TGAATCCGGT CTGTGCGTGG GCCCCATGAT GCGGTTTTTC
AAACTGGATC CCCGCAGCGT GTTCGTCATT CATGATGAAG TGGATTTCCC CCTGGGCGTG
ATCAAGCTGC GGGAAAAAGG CTCCGCAGGC GGCCACAACG GCATTAAATC CCTCATCGCC
CACATGGGCA CCCAGGAATT CCCGCGCCTC CGTTTCGGCA TCGGCCAGCC CCGTGGCAAA
GGGGAAATGA TAGGGCACGT GCTGGGCAAA TTCCGCCCGG AGGAACGCGA GCTTCTGGAC
GTGACGCTTG GCAAGGCGGA GGACGCCGTG CTGTACACCA TGGAACACGG CATTACCAGG
GCAGGCAATA TTTTCAACGC TGTTCCAGGC TGA
|
|---|
| Protein sequence | MDAPVKMIVG LGNPGRTYED TRHNAGFMVL DRLAARWGAV FKADRQRKCE VAAGPGVLLV
KPSTFMNESG LCVGPMMRFF KLDPRSVFVI HDEVDFPLGV IKLREKGSAG GHNGIKSLIA
HMGTQEFPRL RFGIGQPRGK GEMIGHVLGK FRPEERELLD VTLGKAEDAV LYTMEHGITR
AGNIFNAVPG
|
|---|
| |