Gene Amuc_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2072 
Symbol 
ID6274122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2521055 
End bp2521630 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content53% 
IMG OID642614134 
ProductRubrerythrin 
Protein accessionYP_001878662 
Protein GI187736550 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.813169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.122422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA TCAAAGGAAC AGAAACAGAA AAGAATCTTC TCAAGGCTTT TGCCGGGGAG 
TCAGAAGCGC GCAACCGCTA CACCTACTTT GCCGGCGTAG CCAAGAAGGC CGGTTACGAA
CAGATTGCCG CTATCTTTCT GGAAACGGCC GACAATGAGA AGGAACATGC CAAGGTATTT
TTCAAATTGC TGAAAGACGC TTGCATTGAA GTAACGCACG CCGTCTGCAC GGCTCCCCTG
GAATCTACGG AGGATTGTCT GCTGGCCGCC GCCGCCGGTG AACATGACGA ATGGTCCGAC
ATGTATCCTG CATTTGCCGA AGTAGCGGAC AGGGAAGGCT TCCCCGCCAT TGCGGAAACT
TTCCGCAAGA TTGCCTCCGT GGAGCAGCAC CATGAAGCCC GCTATCTCAA GCTGGCTGAA
AATGTGCGCG AAGGCAGGGT TTTTGCCAAG GAAAAGGAAA TCCAGTGGAA GTGCCGCAAC
TGCGGTTATG TACATACCGG TTCCACTGCC CCCAAGGTAT GTCCGGCCTG TGCGCATCCC
CAGGCATTCT TTGAAGAACT GGCGGATAAC TTTTAA
 
Protein sequence
MKSIKGTETE KNLLKAFAGE SEARNRYTYF AGVAKKAGYE QIAAIFLETA DNEKEHAKVF 
FKLLKDACIE VTHAVCTAPL ESTEDCLLAA AAGEHDEWSD MYPAFAEVAD REGFPAIAET
FRKIASVEQH HEARYLKLAE NVREGRVFAK EKEIQWKCRN CGYVHTGSTA PKVCPACAHP
QAFFEELADN F