Gene Amuc_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2054 
Symbol 
ID6274786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2500120 
End bp2500635 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID642614115 
Producthypothetical protein 
Protein accessionYP_001878645 
Protein GI187736533 
COG category 
COG ID 
TIGRFAM ID[TIGR01909] C_GCAxxG_C_C family probable redox protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTT CCAAGGAAGA CCGGGCAGCC CGGGCGCTGG AGTATTTCCA CCAGGGATAT 
AATTGTTCCC AATCCGTTTT TGCTGCTTTT GCAGATGTCT GCGGCCTGAC GGAAGAAACG
GCCCTGAAAC TGTCCTCTCC CCTGGGGGCA GGCATTGGAC GCATGCGGGA GGTATGCGGC
GCTTTTTGCG GAATGAGCAT GCTGGCGGGG AGCCTGTACG GAAACAGTTC CCCGGAAACT
GGAGAAAAGG AAAAAATCTT TTCCCTGGTC CAATCCCTGG CCGCCTCCTT CAAACAGGAA
TTCGGCACTC TTTACTGCCG GGAACTGCTG GGGCTGTCTC CGGAGAGCCT GGCAGCGGAA
ACGGCGCGCC CCGGAGAAAG GACTGCCGCC TATTACGCCT CCCGCCCCTG TGAACGCTGC
ATTGCCTTCT GCGCCCGCTG CGCGGCCGAG CTGGAAGCAA AAGCCCGGCA TCATGAAAAT
ACCCGGCCCC CTTTGCAGGG GAACCGGGCG CTTTAA
 
Protein sequence
MIPSKEDRAA RALEYFHQGY NCSQSVFAAF ADVCGLTEET ALKLSSPLGA GIGRMREVCG 
AFCGMSMLAG SLYGNSSPET GEKEKIFSLV QSLAASFKQE FGTLYCRELL GLSPESLAAE
TARPGERTAA YYASRPCERC IAFCARCAAE LEAKARHHEN TRPPLQGNRA L