| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2042 |
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| Symbol | |
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| ID | 6274779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2481336 |
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| End bp | 2484551 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614103 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001878633 |
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| Protein GI | 187736521 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.798214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0985103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT TCTTCATCAA ACACCCGACC ATTGCCATCG TCATCTCGAT CGTGATGATC
CTGCTCGGCG GCCTGTCCCT GATGGGGCTG CCCATTGAGC AGTATCCGAA CATCGTCCCG
CCCACCATCA AGATGCAGGC GACCTACCCG GGCGCGAATG CGGAGACGGT GGCCAATTCC
GTAGCCTCCC CCATTGAGCA GTCCATTTCC GGCGTCGTGG GGATGGATTA CATGACTTCC
ACCAACGCCA ACAACGGCAT TTGCTCCCTG AGCATCGTCT TTGAAGTTGG CACGGACCCC
AACATGGACC AGACTCTGGC CTACATGCGC TACGGGCAGG CCACCGCCCA GATTCCCGCG
GAGGTCTCCC AGATGGGCAT CACCATCACG CAGTCCACAG GCAGCCCGCT GGCCGTAATC
AACCTGTATT CTCCGGATGA CAGCCTGAAC GCCATCTTCC TGAGCAACTA TGCCTACGTG
AGCCTGGTGG ACCCCGTGAA ACGCGTTCCC GGCGTGGGCG ACGTGCAGGT GTTCGGCGCA
GGCCGCTACG CCATGCGCAT CTGGCTGGAC ACCACCAAAA TGGCCGCTCA GAACATCTCC
GTGGGAGAAG TCCAATCCGC CATCCAGGCG CAGAACACCG TGATTCCCGG CGGCCAGATC
GGCGCGGAGC CGGCCCCTCC CGGAACGGAA TTCACATACA GCATCCAGAC CAAGGGACGC
CTTCAGACGG CTGAAGAATT CGGCAACATC ATCATCCGTG CGGACGGGAA CAAGCTTCTT
TACCTGAAAG ACATCGCCAA GGTGGAGCTG GGTTCCCAGA CTTATAACGT ATCCAGTAAA
TACAACGGCA GGGATTCCGG CGCCATCGCC GTGTACGCCG CTCCCGGCTC CAACGCCATC
AACACAGTGG ACGCCCTGGT CAAGCTCTTT GAAGACCGCT CCCGCAGCTT CCCCGCCGGA
ATGGAATACA ACCTGACGCT GGACACCACG CTGGCCGTGC GCGCCTCCAT TGAGGAAATT
GAGCACACGC TGCTGGAAGC CCTCCTGCTG GTGGTTCTGG TGGTGTTCGT CTTCCTGCAA
GGCTGGCGCG CCACGCTGAT TCCGGCCATC GCCGTTCCGG TTTCCATCAT CGCCACCTTC
GCGCTGTTTC CGCTCCTGGG CTTCACGTTG AATACCATCT GCCTCATGGG CATGGTGCTG
GCCATCGGCC TGGTGGTGGA TGACGCCATT GTGGTGGTGG AAGCCGTGGA ATCCCACATG
GAGCGCGGCC TCACGCCCCG CCAGGCGGCC TTCGCCGCCA TGGAGGAAGT ATCCGGCCCC
GTCATCGCCA TCGCCCTGGT GCTGGCGGCG GTGTTCCTGC CCTCCCTGCT GCTGCCGGGC
ATTACAGGCA CGCTCTTCCA GCAGTTTGCC GTGACCATCG CCATTTCCAT GCTCATTTCC
GCGTTCAACG CGCTGACGCT CTCCCCGGCG CTGTCCGCCA TTCTGCTCAA ACCCAAGGAC
CCGACCAAGG GCGGCCCGCT GAAATTCTTC TACCGCGTTT TCAACCGCAG TTATGACGCC
ACGGCCAGTG GCTACACCAA AGTGTGCCAC TTCCTGACCC GCAAGCTCAT CATCTCCATT
CCGCTGCTGG CTCTGATCGC CTACGCGATT GTCCCCGTAG CCAAGAAAAT CCCCAACGGC
TTCCTGCCGG ACGAAGACCA GGGCTACCTG TTCGCGGCCC TGATCATGCC GGAAGCCCGT
TCCCTCCAGC TGACTACGGC CGCCGCGGAC AAAGTTTCCG AACTCATCCG CCAGAACCCG
AACGTAAAAG ACGTGATTGC CATCTCCGGC TTCAGCCTGC TGACGGGCGT GCAGAGCACG
AACAACGCCT TCTTCTTCGT CATGCTCAAG CCCTGGGAGG AACGCCCCAA TCCGGACCAG
AGCGCCCAGG CGGTCACCGC CCAGCTGAAC GCCCTGCTGA CCACGAAAGT TTCCGAAGGC
ATCACCATGT GCTTCCAGCC TCCGGCCATT GCGGGGGTAG GTTCCGCCAA CGGCGTCACC
TTCATGCTGG AAGACCGCGA CGGCAAGGGC ACGGAATACC TGGCGGAACA AACGGACATC
TTTGTGAAGG AAGCGAACAA GCTTCCGATA TTCGACCCGA ACAACAACGG CGGCGTGCGC
AGCGTGATGT CCTTCGCCGT GGAACAGAAA GATGTGCGGC TGGATGAAGA AAAATGCGCC
ACGCTGGGCG TCAGCATCAG TGAAGCCAAC AGCCTGCTCC AGGCCTACAT GGGTTCCCTG
TTCATCAACT ACATCACCCT TTACGGCCAG CAGTGGCAAG TGTACATCCA GGCGCAGGGC
AGTGACCGCA CCGGAACGGA CATGCTCAAA AACTTCTACG TGAAGAACAA CACGGGAAGC
TCCGTCCCCC TCTCCACCCT CGTGAAAATC ACGGATATCA AAGGGCCGGA ATTCCTGCTG
CGCCAAAACC TGTACAACTC ATCCAAGCTC ATGGTCACGC CCGCCCAGGG CTACTCCAAC
TCCCAGGCCA TGGAGGCGCT GGAAAAAACC TTTGAAGCCA GCATGCCTTC CGACATGGGC
TACAGCTATG CGGACATGAG CTACCAGGAA CAAAAAATCC AGAACGGTAT CGGCATCGTG
CAGATTTTCC TGCTCTCCTC CGTCTTTGTC TTCCTGATTC TGGCGGCCCT GTATGAACGG
TGGTCCCTGC CCCTCAGCAT CTTCATGACG GTGCCCATCG CTGCCCTCGG CGCGTTCCTG
GGCCTGTACT GGTTCGGTTA TGAATTGAAC CTGTACGCGC AAATCGGCCT GGTGATGCTC
ATCGGCCTGG CGGCCAAGAA TGCCATTCTG ATTGTGGAAT TCGCCGTCAT TGAAATGGAA
CGCGGCAAAA CGCTGATGGA AGCGACGCTT TCCGCCGCAA GAATCCGCCT GCGCCCCATC
CTGATGACAT CCTTCGCTTT CATTCTGGGC TGCGTTCCGC TGGCGCTGGC CTCCGGTTCC
GGCGCTTATT CCCGCAATAT CATCGGAATC GTGGTCATTG CCGGGATGAC GATGGCGACG
GTCGTGGGCA TTTTCCTGAT TCCGTGCTCC TTCTACTTCA TCATGAAGCT CTTCCGCGTA
CGCATCGCCC GGAAGACGGT GGAAACGGAA GACCCGGACG AAATCATCGC CCGCAAACAC
CTGTTCCACG AAGCCCATGA ATCATTAAAA GGGTAA
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| Protein sequence | MSSFFIKHPT IAIVISIVMI LLGGLSLMGL PIEQYPNIVP PTIKMQATYP GANAETVANS
VASPIEQSIS GVVGMDYMTS TNANNGICSL SIVFEVGTDP NMDQTLAYMR YGQATAQIPA
EVSQMGITIT QSTGSPLAVI NLYSPDDSLN AIFLSNYAYV SLVDPVKRVP GVGDVQVFGA
GRYAMRIWLD TTKMAAQNIS VGEVQSAIQA QNTVIPGGQI GAEPAPPGTE FTYSIQTKGR
LQTAEEFGNI IIRADGNKLL YLKDIAKVEL GSQTYNVSSK YNGRDSGAIA VYAAPGSNAI
NTVDALVKLF EDRSRSFPAG MEYNLTLDTT LAVRASIEEI EHTLLEALLL VVLVVFVFLQ
GWRATLIPAI AVPVSIIATF ALFPLLGFTL NTICLMGMVL AIGLVVDDAI VVVEAVESHM
ERGLTPRQAA FAAMEEVSGP VIAIALVLAA VFLPSLLLPG ITGTLFQQFA VTIAISMLIS
AFNALTLSPA LSAILLKPKD PTKGGPLKFF YRVFNRSYDA TASGYTKVCH FLTRKLIISI
PLLALIAYAI VPVAKKIPNG FLPDEDQGYL FAALIMPEAR SLQLTTAAAD KVSELIRQNP
NVKDVIAISG FSLLTGVQST NNAFFFVMLK PWEERPNPDQ SAQAVTAQLN ALLTTKVSEG
ITMCFQPPAI AGVGSANGVT FMLEDRDGKG TEYLAEQTDI FVKEANKLPI FDPNNNGGVR
SVMSFAVEQK DVRLDEEKCA TLGVSISEAN SLLQAYMGSL FINYITLYGQ QWQVYIQAQG
SDRTGTDMLK NFYVKNNTGS SVPLSTLVKI TDIKGPEFLL RQNLYNSSKL MVTPAQGYSN
SQAMEALEKT FEASMPSDMG YSYADMSYQE QKIQNGIGIV QIFLLSSVFV FLILAALYER
WSLPLSIFMT VPIAALGAFL GLYWFGYELN LYAQIGLVML IGLAAKNAIL IVEFAVIEME
RGKTLMEATL SAARIRLRPI LMTSFAFILG CVPLALASGS GAYSRNIIGI VVIAGMTMAT
VVGIFLIPCS FYFIMKLFRV RIARKTVETE DPDEIIARKH LFHEAHESLK G
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