Gene Amuc_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2014 
Symbol 
ID6274515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2447048 
End bp2447977 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID642614073 
Productcysteine synthase A 
Protein accessionYP_001878605 
Protein GI187736493 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0387372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTT ACAAAAACAT TACGGAACTG ATCGGCGGCA CCCCGTTGCT GGAACTGACC 
AATTACGAAC GCAGGAATGG CCTGAACGCC ACGCTCCTGG CCAAGCTGGA ATACCTGAAC
CCTGCCGGCA GCGTGAAAGA CCGCATTGCC CAGGCCATGA TTGATGCGGC GGAAGCCGCC
GGGAAGCTGA AGCCGGATTC CGTCATCATT GAGCCCACCA GCGGAAACAC GGGCATCGGC
CTGGCGGCGG TGGCCACTTC ACGCGGGTAC CGGATTATAT TGACCATGCC GGAGACGATG
AGCGTGGAAC GCCGCAACCT TCTGAAAGCC TACGGCGCGG AACTGGTGCT GACGGACGGC
GCGCTGGGCA TGAAGGGAGC CATCTCCAAG GCGGAGGAAC TGGCCGCGGG ACTGCCCAAC
AGCTTTATCC CCGGCCAGTT CGCCAACCCG TCCAACCCGG AAGCGCATTT CCGCACCACA
GGCCCGGAAA TCTGGAATGA TACAGAAGGC AAAGCGGATA TTTTTGTGGC GGGCGTGGGT
ACCGGAGGCA CCATCACAGG CGTGGGCAAG TACCTTAAAA CCCGTAATCC GGACATCCGG
ATCGTGGCTG TGGAGCCGTT CTCCTCCCCC GTGCTGACCC AGGGCACGGC CGGCCCCCAC
AAGATTCAGG GCATTGGCGC GGGCTTCGTG CCGGGAACGC TGGACACCTC CGTGTACGAT
GAAGTCATCG CCGTTACCAA TGAAGACGCT TTCTCCACAG GGAAGGAACT GGCGCGCACG
GACGGCGTGC TGACGGGTAT TTCCTCCGGA GCAGCTCTCT GGGCCGCCAC ACAGGTGGCG
CGGCGCCCGG AGAATGAAGG AAAGACCATC GTCGTCCTGC TGCCGGACAC GGGGGACCGC
TATCTTTCCA CCCCTCTGTT TACGGACTGA
 
Protein sequence
MRIYKNITEL IGGTPLLELT NYERRNGLNA TLLAKLEYLN PAGSVKDRIA QAMIDAAEAA 
GKLKPDSVII EPTSGNTGIG LAAVATSRGY RIILTMPETM SVERRNLLKA YGAELVLTDG
ALGMKGAISK AEELAAGLPN SFIPGQFANP SNPEAHFRTT GPEIWNDTEG KADIFVAGVG
TGGTITGVGK YLKTRNPDIR IVAVEPFSSP VLTQGTAGPH KIQGIGAGFV PGTLDTSVYD
EVIAVTNEDA FSTGKELART DGVLTGISSG AALWAATQVA RRPENEGKTI VVLLPDTGDR
YLSTPLFTD