Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1983 |
Symbol | |
ID | 6273988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2406105 |
End bp | 2408249 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642614043 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_001878575 |
Protein GI | 187736463 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.774356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0211504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA TTCCTGATTT TGCATCCGCC TCCTATCCTG AAATCAAGGC TGGTGCCCCG TCCCCGGCTT CCGAAACGGA AACCTGGATG ACCAATGAAC AAATTCCCGT GCCGCCCACC TACTCGGAAA GCGTGTACGA CGACTGCCTG CACCTGGACT TTACGGCCGG TGTGGCTCCC AACCTCCGCG GACCGTATGC CACCATGTAT GTGGCGCGCC CCTGGACGGT GCGCCAGTAC GCCGGCTTTT CCACGGCTGA GGAATCCAAT GCCTTCTACC GCCGCAACCT GGCGGCGGGC CAGAAGGGCC TTTCCATTGC CTTTGACCTG GCGACGCACC GCGGCTATGA CTCCGATCAC CCCCGCGTGG TGGGTGACGT GGGCAAGGCC GGCGTGGCCG TGGACTCCAT TCTGGACATG GAAATCCTCT TCAAGGGCAT TCCCCTGGAC AAAATGTCCG TTTCCATGAC CATGAACGGC GCCGTGTTGC CCGTGCTGGC CTTCTACATC GTCGCCGCCC AGGAACAGGG CTGCACGCTG GACCAGCTCT CCGGCACGAT CCAGAATGAC ATTCTCAAGG AATACATGGT GCGCAACACC TACATTTACC CGCCTGATCC CTCCATGAGG ATTATTGCGG ACATCTTTGA GTTCACCTCC AAGTACATGC CCAAGTTTAA CTCCATTTCC ATCTCCGGCT ACCACATGCA GGAGGCCGGC GCTACGGCGG ACCTGGAAAT GGCCTACACC CTTGCGGACG GCCTAGAATA TGTCCGCACC GGGATCAAGG CGGGCATTGA CATTGACGCC TTCGCGCCGC GTCTTTCCTT CTTCTGGGCC CAGGGCAAGA ATTACTTCAT GGAAGTGGCC AAAATGCGCG CCGCCCGCGT GCTGTGGGCC AAACTCATCA AGCAGTTCAA TCCCAAGAAC CCGAAGTCCC TGGCCTTGCG CACGCACTCC CAGACTTCCG GCTGGTCCCT CACGGAACAG GACCCGTTCA ACAACGTCAC CCGCACCTGC ATTGAGGCCC TAGCCGCTGC CTGCGGCCAT ACGCAGTCCC TGCACACGAA CTCCCTGGAC GAAGCGATTG CCCTGCCGAC GGACTTCTCC GCCCGCATCG CCCGCAACAC CCAGCTTCAT CTTCAGGATG AAACCACCAT CTGCAAGGTA ATCGACCCGT GGGGCGGTTC CTACTATGTG GAATACCTGA CCAATGAGCT CATTCGCAAG GGCTGGGCCC ACCTTCAGGA AGTGGAAAAA CTCGGAGGCA TGGCCAAGGC CATTGAAACC GGGCTGCCCA AGATGCGCAT TGAAGAAGCC GCAGCGCGCC GCCAGGCCGC CATTGACTCC GGAAAGGAAC CCATCATCGG CGTTAACAAA TACCGTCTGG AACAGGAAGC CCAGATCGAT ATTCTGGAAG TGGACAACAC CACCGTCCGG GAAGCCCAGA TCGCCCGCCT GCAGAAACTG CGCGCGGAAC GGGACTCCGC CGCGTGCGAA GCCGCGCTGG AAGCCCTGTC CGAATGCGCC CGCACGGGGG AAGGCAATCT CCTTGACCTT GCCATCAAGG CGGCCAAGGC CCGCGCCTCC CTGGGTGAAA TCTCCTCCGC CCTGGAAAAA CACTTCGGGC GTCATAAAGC ACCAATCAAA CTCATTACCG GCGTGTACGC TCAATCCTAT GGTCAAGATC CGCTGGTGGA GGAAGTCCGC AAGATGACGG ATGACTTCGC CGAACGCACG GGGCGTCGTC CCCGCATCCT TGTCGCCAAA ATGGGCCAGG ACGGCCATGA CCGCGGCGCC AAGGTGGTCT CCTCCGCCTA TGCCGACCTC GGTTTTGACG TGGACGTGGG CCCGCTCTTC CAGACGCCGG AGGAAACTGC CAAAATGGCG ATTGAAAACG ACGTGCACAT GATCGGCATG AGCTCTCTGG CCGCCGGCCA CAAGGTTCTC CTTCCCGCCC TGGTGGAGGA ACTTGCCAAG CAGGGCCGTC CGGATATCCT GGTCTTCTGC GGCGGCGTTA TTCCCGCCCA GGACTATGAC TTCCTGAAGG AACACGGAGC TGTGGCCATC TTCGGCCCGG GCACCAACAT TCCGGAAGCT TCCAGGGAAA TCATGGAAGC TCTTAACGAA CAGTACGCTG ACTAA
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Protein sequence | MSNIPDFASA SYPEIKAGAP SPASETETWM TNEQIPVPPT YSESVYDDCL HLDFTAGVAP NLRGPYATMY VARPWTVRQY AGFSTAEESN AFYRRNLAAG QKGLSIAFDL ATHRGYDSDH PRVVGDVGKA GVAVDSILDM EILFKGIPLD KMSVSMTMNG AVLPVLAFYI VAAQEQGCTL DQLSGTIQND ILKEYMVRNT YIYPPDPSMR IIADIFEFTS KYMPKFNSIS ISGYHMQEAG ATADLEMAYT LADGLEYVRT GIKAGIDIDA FAPRLSFFWA QGKNYFMEVA KMRAARVLWA KLIKQFNPKN PKSLALRTHS QTSGWSLTEQ DPFNNVTRTC IEALAAACGH TQSLHTNSLD EAIALPTDFS ARIARNTQLH LQDETTICKV IDPWGGSYYV EYLTNELIRK GWAHLQEVEK LGGMAKAIET GLPKMRIEEA AARRQAAIDS GKEPIIGVNK YRLEQEAQID ILEVDNTTVR EAQIARLQKL RAERDSAACE AALEALSECA RTGEGNLLDL AIKAAKARAS LGEISSALEK HFGRHKAPIK LITGVYAQSY GQDPLVEEVR KMTDDFAERT GRRPRILVAK MGQDGHDRGA KVVSSAYADL GFDVDVGPLF QTPEETAKMA IENDVHMIGM SSLAAGHKVL LPALVEELAK QGRPDILVFC GGVIPAQDYD FLKEHGAVAI FGPGTNIPEA SREIMEALNE QYAD
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