| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1970 |
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| Symbol | |
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| ID | 6274913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2389617 |
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| End bp | 2393159 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642614032 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_001878564 |
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| Protein GI | 187736452 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.23883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.000751585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCACAG ACAACTCGCA AACCATACTC AAACTGCGTA CAGGCCAGGA AATCATCCTC
CCCCAGAGGA AAGACCTGCT GGGCGGTTTG AAATTCACCA GAAGATTTTC ACACAATGAA
GTCCACCCCT ATGATGAAGT GGACTGGACA CGCCGCGACG TCCGCATTAT GGATTGGAAA
ACCGGCAAGA CCATTTACGA GCGCCTGGGT CTGGAAGCTC CGGCCCACTG GGATGACAAC
GCCGTCAAAA TCACGGCGGA CAAGTACCTT TTCGGCAGTG AACCCGGCTC CCTAGAATAT
GAAGACAGCT TCCGCAATAT CTACGACCGC ATTTCCAATA CCTATACCGT ATGGGGATGG
GAGGAAGGCT ACTTCGCCAC GCTGGAGGAC GCGGAAATTT TCAATGAGGA AATCAAGGCC
ATGCTGGTGC AGCAGATATG GGCGCCCAAC TCCCCCGTCT GGTTCAACAT CGGCCACTGG
GAGCAGTGGC GCTGGGGACG CCCGGACCTG AGGGAAAACT ATACAGGCCA CGGCAACAAG
GCCTACCATA CCAAAGGGAC CAAGAACAAT CTGAAAACCT TCATGGTCCA GTCTACGTAT
GAATACCCCC AGTGTTCCGC CTGCTTCCTG ACGGAAGTGG GAGACAGCAT GGAGGATATT
CTGGACCACC TGACGACGGA AGGCCGTATT TTCGCGTCCG GTTCCGGAGT AGGCATCAAC
CTGTCCACCC TCCGGTCCTC TAAGGAGCCC ATCAGCGGCA AGGGCCGCTC CTCCGGCCCC
ATCTCTTTCG ACCGCGGCTG GGACCGCATG GCCGGAGCCA TCAAATCCGG AGGCAAGACG
CGCCGCGCCG CACGCATGGT CCTGATGTTC AGCGACCACC CGGATATTTT CGAATTCATC
AATACGAAAA ACCGCCAGGA AGACATCGCC AAGGTTATCC TGCGCGAACA CAACGTGCAT
GTGGAGCTCA AGCAGATTGC GGAGACCAAG CTGGTTGCCG GCACTCCGGC GGAAAAGGCC
GCCGCCCGCG TCATTCTTTC CCTTCCCCTG GCCACCCGGA ACAGTTTTGA CCCGCACATG
GACGCCCTGC TGTACGGGGA AACGCTTTCC CACCAGAACG CGAACCATTC CGTTTCCCTG
AAGGGGGATT TCTGGCAGGC GCTCGCCAAT AACGGCAATA CCTACACGCG CTGGGTCACG
AATCCGGCCC ACATCGAACA GACGTTCCGC GCCCAGGAAC TTCTGGAAGC CATGGCCCAG
TCCATCTGGG ACAACGGGGA ACCCGGCGTG CACAATAACG ACGTGATCAA CCTGTGGAAT
CCCGTCAAAT CCATCGGCAC CATCACTACG TCCAATCCCT GCTCGGAATA CGTCTTCCTG
AACAATACGA GCTGCAACCT TTCCTCCTTC AACGCCTATC GCTTCCTGAT CAAGGGAGAG
GACGGCAAGC CCGTTTTTGA TGCGGACGCC CTGACCCACG CCGCCCGCCT GGCCATGGTC
TGCGCGGACC TGAATGTGGA ACGCGGCGGC TTCCCGATTG AAGAAATCGC GGAGGGCACC
TACAAGTACC GCACCACGGG CATCGGCTTC GCCAACGTGG GCGGCTCCCT GATGGCCCTG
GGCGTGCCTT ACGATTCCGA CGAAGGCCGC TGGATTGCCT CCCAGCTTTG CAGTGCCCTG
ACGGCGGCCT GCTGGACGGC CTCCGCGGAA ATGGGCGCGG AACTGGGTTC CTACGTGGAA
TACCCCGCCA GCAAGAAAGA CCTGCTCGCC GTGCTGCGCC TGCACAACGC AGCCCAGAAA
CTGGCAAGCG CCCTGCCCTC CCAGAAGGAC TCCAAGACGC TGGACGACCT GATTGAGAAC
ATCATCGCCA ATGCCGGAGG GATCCTGCCG GAAGCGCAGG GGCTCACCGC CTCCTATGCC
CTGCATGCCT ACCTCAAGAG CTTCAAGGCC CCCACCATGA TGAACAGGGA GCGCATCGCC
CCTGCGGCCA AGCTGGCGGA AGCCGCTTCC GACATGTGGG CGAAGGTGAT CAAGGCCACG
GCGCACCGCA ACGCGTTTGT TTCCGTGATG GCACCCACGG GCACCATTTC CGCCCCGCTG
GGCTGCTATG ATGAAGGCAC TACTTCCATT GAGCCGGATT ACACGCTGGT GAAATGGAAG
CAGCTGGCGG GCGGAGGCTC CCTGAAGATG TTCAACCGCC TGGCCCTGGA AGGCCTCCGC
TCCCTGGGTT ACCCGGAAGA CTTCGTCAAT GAAGCCGCTC TGGAAGTGGC GGGCCTGGAC
GGCCTGATTT CCGCGTTCCA GGGGAATATG GATTACGTCG TGAACCAGCT CATTGTGGAC
CCCTGCAATG ACCAGGCCGG CCCCGTGCGC CTCGCGTGGC GCCGCCTGCT CTCCGGAACG
GAATCCCGCA GTGAAATTCA GGAAAAAGTG GCTTATATCA GCAACCCGGC CAACATGGCC
GTGCTGACGG CGGATGAACT CGCCGTAGTC AACGGAGCCG CCCATATTGA ATCCATACCG
TGGCTGAATA AGAAGGACCT GCCGGTCTTT GACTGCGCCG CCACCAACGG CAACGGCATC
CGTGCCATTT CCCCCGCCGG CCATGTGCTG ATGCTGGGCG CCCTCCAGCC CTTCATCTCC
GGCGCGTGCT CCAAGACGGT CAACATGCCC GTCTCCGCCA GCGTGCAGGA TATTTACGAT
TCCCTCATCA TGTCCCACGA GCTGGGCGTG AAGTGCATCG CCATCTTCCG CGCCGGATCC
AAGGCGAATG CCGTTTACGT GGTGGATACC CCGGAAACGC GCATGTTCAA GGCCAACCAC
GTCTGGGAAC AGCTGGTGAA TGCCGGATCG GACGCCATTG ACGAAATCAT CGCGGAGGCA
TCCAAGCCGC GCCAGCGCAA GCTGCCCGGT CGCCGTCTGG GCCAGACCGT AAAATTCTCC
GTAGGCGGCC AGCTGACGGG CTACCTGACG GTAGGCGTTT ATGCGGACGG CACCTGCGGG
GAAGTTTTCG GACGCCTGGG ACAAGTCGGC TCCTTCGCCT CCGGCATGTT TGAAGCTTAC
TGCAAACTCC TTTCCACCGC CCTTCAGTTC GGCGTGCCTC TCAAGGAAGT GGTCAAGGGT
TTCCGCAATT ACTCCTTCGA GCCCTCCGGG TTCTGCCGCG TGGGGGACGA CACGGAGGCG
GACACCTGCA CGGAAATCCG CTCCTGCGCT TCCGTGGTGG ATTTGATTGC CAAAATCCTG
GCGTGGCTTT TCCCGGAAAG CAACGGCTAC CGCCTGCGGG ACGTATTCTC CATCCCCAGC
GTCAGCCTTC CGGGCCAGGC TCCGGATACG ACGGTAAGCG TGCTGCCCCC CCGCATCATC
ACCACTCCGG CGCATCCCGC TACTCCGGCC CTGCCGGAAA TTCCCGCCGG AAAGGTTCCG
GAAGGAACGA TGCTCAACGG CGCCTCCCTC TGCCCGCAGT GCCACTCCCT GGCCTATGTC
CAGGACGGCA AATGCAAATC CTGCCGCTCC TGCGGATACA AGGACGGCGG CTGCGGGGAA
TAA
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| Protein sequence | MITDNSQTIL KLRTGQEIIL PQRKDLLGGL KFTRRFSHNE VHPYDEVDWT RRDVRIMDWK
TGKTIYERLG LEAPAHWDDN AVKITADKYL FGSEPGSLEY EDSFRNIYDR ISNTYTVWGW
EEGYFATLED AEIFNEEIKA MLVQQIWAPN SPVWFNIGHW EQWRWGRPDL RENYTGHGNK
AYHTKGTKNN LKTFMVQSTY EYPQCSACFL TEVGDSMEDI LDHLTTEGRI FASGSGVGIN
LSTLRSSKEP ISGKGRSSGP ISFDRGWDRM AGAIKSGGKT RRAARMVLMF SDHPDIFEFI
NTKNRQEDIA KVILREHNVH VELKQIAETK LVAGTPAEKA AARVILSLPL ATRNSFDPHM
DALLYGETLS HQNANHSVSL KGDFWQALAN NGNTYTRWVT NPAHIEQTFR AQELLEAMAQ
SIWDNGEPGV HNNDVINLWN PVKSIGTITT SNPCSEYVFL NNTSCNLSSF NAYRFLIKGE
DGKPVFDADA LTHAARLAMV CADLNVERGG FPIEEIAEGT YKYRTTGIGF ANVGGSLMAL
GVPYDSDEGR WIASQLCSAL TAACWTASAE MGAELGSYVE YPASKKDLLA VLRLHNAAQK
LASALPSQKD SKTLDDLIEN IIANAGGILP EAQGLTASYA LHAYLKSFKA PTMMNRERIA
PAAKLAEAAS DMWAKVIKAT AHRNAFVSVM APTGTISAPL GCYDEGTTSI EPDYTLVKWK
QLAGGGSLKM FNRLALEGLR SLGYPEDFVN EAALEVAGLD GLISAFQGNM DYVVNQLIVD
PCNDQAGPVR LAWRRLLSGT ESRSEIQEKV AYISNPANMA VLTADELAVV NGAAHIESIP
WLNKKDLPVF DCAATNGNGI RAISPAGHVL MLGALQPFIS GACSKTVNMP VSASVQDIYD
SLIMSHELGV KCIAIFRAGS KANAVYVVDT PETRMFKANH VWEQLVNAGS DAIDEIIAEA
SKPRQRKLPG RRLGQTVKFS VGGQLTGYLT VGVYADGTCG EVFGRLGQVG SFASGMFEAY
CKLLSTALQF GVPLKEVVKG FRNYSFEPSG FCRVGDDTEA DTCTEIRSCA SVVDLIAKIL
AWLFPESNGY RLRDVFSIPS VSLPGQAPDT TVSVLPPRII TTPAHPATPA LPEIPAGKVP
EGTMLNGASL CPQCHSLAYV QDGKCKSCRS CGYKDGGCGE
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