Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1943 |
Symbol | |
ID | 6275168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2358729 |
End bp | 2361482 |
Gene Length | 2754 bp |
Protein Length | 917 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642614003 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_001878537 |
Protein GI | 187736425 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.0509436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGACTC CTCTCCCCCT TGGCATTACC CTTGCTTTGT CCCTGACCTG CGGCTCCATG CCCCTTCTGG CCCAGGGGTC GTATATGCCC GGCCCCATGC CCGCCACCGC CGGGACAAAG CAGGATCCAA CGGACATGTA CCTGGAGGCG TTGAGGCTGG TGACCCAAGC CGCAGGACTG GTGGAAAAAC GGGATTATAT AGGAGCCATC CGCCTGACAC AGCAGGCGGA AGACAAGTTC GGACGCCTGG CTAAGTCTTA TCCCCAATGG CGCCCCAACC TGCTGCAAAC GCGCCGCCAG CTCAACAGGG AAAATCTGGA CCAGTGGCAG AAGCTGGCCC AGCAGCAGGC CGCCGCCTCT TCTTCATCCG GCCTGGAGCT GGAACGCCCG GCCTCCGTGC CGAAGCGCCC CAGGCCAAAA CCCAACATAG CCCTCCCTCC CGGCTACAAG GGCGTGGAAT TCCCTACCCG TCCCGGAGAA TCCCTGATCA ATACCATCCC GTCCCCTTCC GTTTCTCCCG GGGCGGCTCC GGAAGTGGTG GAGAGCAATT ACGAACGCAT CCGCAGACTG CTGGATAAAA CCACCATGGA GAACAATGCT CTGATCCAGG CTCTCAAGCG CACCCGCCGG GAGCAGGAGG AGATTCTGGC AAAACTGGCC GTGGCATCCG CCGGAGAATC CGTTTACCGA GATGAATTGC TCAAGGTCAA AAAGCAGATG GAGGATGAAA GAAAGACCAG CAACAAGCTT ATTCAGACTC TCACCAGGAG AGTGGAGGAA CTGGAACAAA ATGTCACCTC CCTCAGCCAG GACAAAGCCC GTTATCTGGC GCAGATCGCC GATCTTCAGC TGCAGCTCAA GGAGTACCAG GACAAGCTGG ACAAAGTGAC GGATGAGAAA AACGCCCTTC AGAAAGACCG GGACCAATTG GCGGCCCTGG TGGAGCTCAA CAGCCCGGAC AAAACAAAAA ACCTGTTGGA CCGCAACCTG ACGCTGGCGG CCCAGCTCAA GGATGCCCAG GACAAAATCG CCGCTCTGGA AACAGCCAAA TCCGATTCCG AAGAACAGCG GAAAGCCAAC CTGAAAGCGT TGGAAGAGGC GCGTGAGGAA TCCGCAGACC TGAAACAGAA ACTGATTGCC ATCCGGGATG AAAACATCGG CTACCGCAAA CGCATCACAG AGTTGAATAC CAAGCTCATC AATGCGGATG TGGAACTGTC CAAGCTGGAG GCCAATCCGG AAAAAAGCCC GCTTCTTCTG GAAGAAAACC AGCTGCTGCG CTCCACCATC GCCAAGCAGC TCCGCATACT TTCCGTGCAG GACCAGAGCC GCTCCCTGCT CATCAGCACT TATAAGCGGC TGCATCAGGA AAATCCGGAC ACGGCGGAAA TAGCCTCCCT GATGGACAAT GAAGAAGCCA TCAAGCTCAC TCCTGCGGAA AAACAAATTG TCAACGCCAT TGCCAGGGAT AACAATATCA ATGTTCCCCT GACGGATCAG CAGAAGGAAA AAATCAACAA GCTGGCACAG GCCCTCTCTG CGGAACGCGG CAAGGCCGCC CAGCTTGCTC GGGATTTGGA ACTGGCGCGC AGCCAGATGA AGACCAAAGC GGACAAATCC GCCAGAAACG ACAAGAAACA GGCGGAAGCC CTGGCGCGGG CCCAGAAGGC CCTGGAACAG AAAAACATTC AGGTGGAGGA ACTCACCCGG CAGATGGAAG AACTGAAAAG CCGTTCCGCC GAACAGGCCC GCCTGGCCGC CATCTCCGCC GGAACCATTA CTCCGGACCA GGAAAAAGCG CTGAACCGGA GCATGGAAGC CACGGTACGC CGGAAGCTGG AGGCGGAAGC CCTGGGGCAA GGCGCCGCAG AAGCCTTCGC CAAAAAACGC TATGCCGCCG CAGAACAGCT GTACCGGACT TTGCTGGACT TCCAGCCGGC TCACGTTCCG GCCCTGGTCA ATCTGGGGAC CATTCTGCTT CAGCGCAACA AGGCGGAGGA AGCCATCAAA TTTCTGAAAA AAGCCACGGA ACTGGACGCC TCCTCCTCCC CCGCATGGTT CATGATGGGG GTGGCCCAAT ACCGCGCCGG GGAAGACCAC CACGCCATCG CCTCCCTGAC GGAAACGGTC AGGCTGGATC CGGCCAACGC TCCCGCCCTG CTTTACCTGG GCAACCTGGA AACCAGCGCC GGGAACTATG AAAAAGCGGT GGCCCACTTT GAAAACGCCC TGAAAATCCA GCCGGAATCA CCGGACGCGC ACTTCAACCT GGCCTGGACC TATTCCCGGC TGGGCCGCAC GGCGCAGGCA CGCAAAAGCT ATGATGCAGC CATCCGCTGC GGAGGCTTGC CGGATTCCGA CCTGGAGCTT GCCATTACCG GAACCACCAC CCTTCCCCGC AAAAAACAGG CTGCGGACCA GAATCCCGCC TCCGCCGCAA AAGAGGACGG CCCCCAGCTG GCCGCGGCAA TAAGCGATCC GTCTGCCATT CCCCACGACG CCAATGAAGT GCCTGCTCAT GTGGCGGAGG ATCCGAATGC GCAGGAAAAG CCGTCCGCCG GTCCCAAACA GGTCGTCGTC AGCCACCGTC CGGAAACCGA ACCCATCTCT CTGGCAGCCC AAATGAGGGA AACTGCCCCT GCGGCGGCAT CCGCACAACC TCCGGCAGAA GCCGCAACTG CCGCAACGGA AACGCCCAAG CCGGAAAAGC AGGAACCTCC GCGCAGGAAA AGCCGTTTCC GAATCGGTTC CTGA
|
Protein sequence | MMTPLPLGIT LALSLTCGSM PLLAQGSYMP GPMPATAGTK QDPTDMYLEA LRLVTQAAGL VEKRDYIGAI RLTQQAEDKF GRLAKSYPQW RPNLLQTRRQ LNRENLDQWQ KLAQQQAAAS SSSGLELERP ASVPKRPRPK PNIALPPGYK GVEFPTRPGE SLINTIPSPS VSPGAAPEVV ESNYERIRRL LDKTTMENNA LIQALKRTRR EQEEILAKLA VASAGESVYR DELLKVKKQM EDERKTSNKL IQTLTRRVEE LEQNVTSLSQ DKARYLAQIA DLQLQLKEYQ DKLDKVTDEK NALQKDRDQL AALVELNSPD KTKNLLDRNL TLAAQLKDAQ DKIAALETAK SDSEEQRKAN LKALEEAREE SADLKQKLIA IRDENIGYRK RITELNTKLI NADVELSKLE ANPEKSPLLL EENQLLRSTI AKQLRILSVQ DQSRSLLIST YKRLHQENPD TAEIASLMDN EEAIKLTPAE KQIVNAIARD NNINVPLTDQ QKEKINKLAQ ALSAERGKAA QLARDLELAR SQMKTKADKS ARNDKKQAEA LARAQKALEQ KNIQVEELTR QMEELKSRSA EQARLAAISA GTITPDQEKA LNRSMEATVR RKLEAEALGQ GAAEAFAKKR YAAAEQLYRT LLDFQPAHVP ALVNLGTILL QRNKAEEAIK FLKKATELDA SSSPAWFMMG VAQYRAGEDH HAIASLTETV RLDPANAPAL LYLGNLETSA GNYEKAVAHF ENALKIQPES PDAHFNLAWT YSRLGRTAQA RKSYDAAIRC GGLPDSDLEL AITGTTTLPR KKQAADQNPA SAAKEDGPQL AAAISDPSAI PHDANEVPAH VAEDPNAQEK PSAGPKQVVV SHRPETEPIS LAAQMRETAP AAASAQPPAE AATAATETPK PEKQEPPRRK SRFRIGS
|
| |