| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1906 |
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| Symbol | |
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| ID | 6274507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2311998 |
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| End bp | 2312885 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642613967 |
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| Product | integrase family protein |
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| Protein accession | YP_001878501 |
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| Protein GI | 187736389 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.713326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.217947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTC ATTTGGAACG CTTCATCCGT TTTCTGGCCG CGGAGAAAGG CCTGAGCACC
GCCTACCAGC TTTCCGTGAG ACAGACCCTG GAGGAATTTG CCCGGTTTCT GGAAATGGAT
AATACCGGCC TTGCCCAAAC GGGCATCGAC ACGCTTTCGG CATTTCTGCG GCATTTGCAG
GACCGGGGCA TGGCCCGCAG CTCCATGCGG GTGGAAATGG TGCATCTGCG TATTTTTTTC
CGGTGGCTGG CCGGAACGGG AATACTGGAA AAAGACCCTT CCGTATTTCT GGAAATGCCC
CGGCAGGGGT TGTCGCTTCC TCATGTGCTG GATCAGAAAA CCGTCTCAAA TTTGCTTGAA
AGCATTGACA TTCAAGATAT TCCTCTGGGA TGTAGAGACA GAGCGCTTCT GGAGATGATT
TACGCCTGCG GGATGCGTGT TAGTGAAATA ATTAATTGCA AATTAGAGAG TTTTGATAAA
GATGAAGCTT TTGTCCGCGT GCTGGGGAAG GGGAATAAAA CCCGGCTGGT GCCCGTAGGG
AGATCCGCTT TGGATGCTTT GCAAATGTAT TTGGAAAAAG GAAGACCCAA ACTGGTCAGG
ACGGGAACGA AAAGCCACAT CTTTCTGACA GTACGCGGCC GTCCGTTGAC GAGGGAGCGG
ATTCGTCAAA TTCTCCGGGA ACGCGCCAGA GCCGCAGGAC TGGAACAGCA TGTTTTCCCG
CATATCCTGC GTCATTCCTT CGCCACGCAT CTTCTGGAAA ACGGAGCGGA TCTGCGTATT
ATTCAGGAGA TGCTGGGCCA TGCCGATATT TCAACCACCC AGATCTATAC GCATTTGGAG
CAGCAGCGGC TGAACTCGAT TCATCACCGC TTTCATCCCA GAGGATAG
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| Protein sequence | MQTHLERFIR FLAAEKGLST AYQLSVRQTL EEFARFLEMD NTGLAQTGID TLSAFLRHLQ
DRGMARSSMR VEMVHLRIFF RWLAGTGILE KDPSVFLEMP RQGLSLPHVL DQKTVSNLLE
SIDIQDIPLG CRDRALLEMI YACGMRVSEI INCKLESFDK DEAFVRVLGK GNKTRLVPVG
RSALDALQMY LEKGRPKLVR TGTKSHIFLT VRGRPLTRER IRQILRERAR AAGLEQHVFP
HILRHSFATH LLENGADLRI IQEMLGHADI STTQIYTHLE QQRLNSIHHR FHPRG
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