Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1874 |
Symbol | |
ID | 6273706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2278834 |
End bp | 2279496 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642613935 |
Product | cytochrome c class I |
Protein accession | YP_001878469 |
Protein GI | 187736357 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0991365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGGAG GCATCACGGC GGTAGCAGCC CTTGTTCTGC TGGGAGCACT CTGGTTCCTG GCAGGGGACG ACGATGGAAG AAATGCCGTT CCCCGTTTGT TTGACAATAT GAATGATCGT CCTCTGGCGG ATGCCCAGCA GGTGGGGATT TCTTCCGCCG CTCCGGACCG GAAAGCGCGC CTGACGCCTC CCCGTTCCGT GGCGCAGTCC CTGGGCATGA ACGGAACGGT CCGAAAACGG GAGGATGACC GGGACTCCTT TGCTGCGGAA GGTTCCTATT TTTCCTCCGG CCGCATGCAG GGCGGAGAGG AGGATTCCAT GCCTCTGGAA CTGGGCGGCA TCTCCCGCAG CCGCGACGTG CTGGCGGAGG GGCGCGCGCT TTATCTGGCG CATTGCGCCG TTTGCCACGG AGAGGACGGA AGCGGACGCG GAAGCATGGC CGCTTATGAC ACCTATCCGC AAATAGGCCC CTTCCGGGAT GAAAAATATG CTTCCTATTC TTCTGGAAAA ATGTTCAGGA GCATTCGGTT GGGGCAGGGG AACATGCCCG CTTTCGGAAA CATTCTCACG GCGCGGGAAA TCTGGTGTCT GGTGGCGTTT ATCCGCCATT TGCAAGCGCC GCCGGAAGAA CCTGCCGTTC AACAAAAGGA ACAACATTCA TGA
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Protein sequence | MRGGITAVAA LVLLGALWFL AGDDDGRNAV PRLFDNMNDR PLADAQQVGI SSAAPDRKAR LTPPRSVAQS LGMNGTVRKR EDDRDSFAAE GSYFSSGRMQ GGEEDSMPLE LGGISRSRDV LAEGRALYLA HCAVCHGEDG SGRGSMAAYD TYPQIGPFRD EKYASYSSGK MFRSIRLGQG NMPAFGNILT AREIWCLVAF IRHLQAPPEE PAVQQKEQHS
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