| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1840 |
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| Symbol | |
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| ID | 6274794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2236215 |
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| End bp | 2238038 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642613903 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001878438 |
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| Protein GI | 187736326 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.170642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATA CCTCCAATTT GTCTTATCCC GGTTCCCGCC GCATTTATGT TCCGGGCCGT
CTGTACCCGG ATGTTCGGGT TCCCATGAGG GAAATCATTT TGGGCGATAC CTTGTTGCCC
GACGGCACCG CCCACCCTAA TGACCCGGTG CGCGTGTACG ATTGCTCCGG CCCCTGGGGG
GACGCTGCTT ATGAGGGAAC TGCGGAGGAG GGGCTTCCCT CCCTGCGTGC CGCCTGGATA
CGGGCCCGCG GGGATGTGAA AGAGGATGTG GGGCACGAGC GCACCCTGCG TGCTGCGGGC
AAGACGCCTG TGACACAGCG TTATTACGCC CAACAGGGCG TCATTACGCC GGAAATGGAA
TTTGTCGCCA TCCGGGAAAA TCTGGGCAGG GAACAGGCTT TCAAGGCGAT ATACGACCGC
TATCCAAATG CCAAGAGCCG CCCGGACGAA GCTGCGGAAG CCCTGGAAAC GCTCACCATG
ATGCCGCGTC CGTCCGAATT GGAGGCGCAG GAGGGATTTG GGCCGTCCAG CATGGTGGCC
CGCGACCGCC TGGATCACCA GCATGCCCCG GAACGCCGGA ACGGCTGCCG CATGCCTGCC
TACTTTACGC CGGAATTCGT CAGGGATGAA ATTGCCTCCG GCCGTGCGCT GATTCCCGCC
AACATCAATC ATCCGGAATG TGAGCCGATG GCTATCGGCC GCAATTTCCT GGTAAAAATC
AACGCCAACA TAGGCAACTC CGCGCTGGGA TCCAGCATTG AGGAGGAGGT GGAAAAGCTG
CGCTGGGCCA TTCACTGGGG GGCGGATACC GTTATGGACC TGTCCACCGG GAAGAATATC
CACGCGACGA GGGAATGGAT TTTAAGAAAC TCCCCTGTCC CCATCGGTAC TGTTCCCATT
TACCAGGCTC TGGAAAAGGT GGGAGGAAAG GTGGCTGACC TGAGTTGGGA GGTTTTTCGC
GATACCCTGC TTGAACAGGC CCGCCAGGGC GTGGACTATG TGACGGTGCA CGCCGCCCTT
CTGCTCAGGT TCGTGAACCA TACGGCGCGG CGCATGACGG GCATCGTTTC CCGCGGCGGT
TCCATCATGG CGCAGTGGAG CATGATCCAC GAACAGGAAA ATTTCCTTTA TTCCCATTGG
GATGAAATTT GTTCCATTCT GGCGGCTTAC GATATTGCCG TCTCCATCGG GGATGGCCTG
CGGCCCGGTT CCGTGGCGGA CGCCAACGAC TTCGCCCAGC TGGCGGAGCT GGAAGTGCAG
GGGGATTTGA CCATGCGCGC GTGGAAAGCG GGCGTGCAGG TCATGAATGA AGGCCCCGGC
CACGTTCCCA TGCACCTTAT TAGGGAGAAC ATGAGCAAGC AGCTGGAATG GTGCATGGAA
GCGCCCTTTT ACACGCTGGG GCCGCTGGTA ACGGACATCG CCCCCGGTTA CGACCATATT
ACCGGAGCTA TCGGAGGGGC GATTATCGGC CAGCTTGGCT GCGCCATGCT TTGCTATGTA
ACCAGAAAAG AGCATCTGGG GCTTCCTGAC CGGGAGGATG TGAGGGAAGG CGTGGTTGCC
TACAAGCTGG CGGCCCACGC CGCAGACCTG GCGAAGGGGC ATCCATCCGC GCAATGGAGG
GATAATGCTC TGGCCCAGGC CAGGTTTGAA TTCCGCTGGG AGGATCAATT CAACCTTTCC
CTGGATCCGC AAAAGGCCCG TTCCTTCCAT GACCTGACGC TTCCCCATGC CAACGCCAAA
AAAGCCCATT TCTGTTCCAT GTGCGGTCCG GACTTCTGCG CCATGCGCCT GAGCCAGGAT
ATCCGCCGCC GCTCACAGCA ATAG
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| Protein sequence | MNDTSNLSYP GSRRIYVPGR LYPDVRVPMR EIILGDTLLP DGTAHPNDPV RVYDCSGPWG
DAAYEGTAEE GLPSLRAAWI RARGDVKEDV GHERTLRAAG KTPVTQRYYA QQGVITPEME
FVAIRENLGR EQAFKAIYDR YPNAKSRPDE AAEALETLTM MPRPSELEAQ EGFGPSSMVA
RDRLDHQHAP ERRNGCRMPA YFTPEFVRDE IASGRALIPA NINHPECEPM AIGRNFLVKI
NANIGNSALG SSIEEEVEKL RWAIHWGADT VMDLSTGKNI HATREWILRN SPVPIGTVPI
YQALEKVGGK VADLSWEVFR DTLLEQARQG VDYVTVHAAL LLRFVNHTAR RMTGIVSRGG
SIMAQWSMIH EQENFLYSHW DEICSILAAY DIAVSIGDGL RPGSVADAND FAQLAELEVQ
GDLTMRAWKA GVQVMNEGPG HVPMHLIREN MSKQLEWCME APFYTLGPLV TDIAPGYDHI
TGAIGGAIIG QLGCAMLCYV TRKEHLGLPD REDVREGVVA YKLAAHAADL AKGHPSAQWR
DNALAQARFE FRWEDQFNLS LDPQKARSFH DLTLPHANAK KAHFCSMCGP DFCAMRLSQD
IRRRSQQ
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