Gene Amuc_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1810 
Symbol 
ID6275077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2196923 
End bp2197408 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content53% 
IMG OID642613874 
Producttranscriptional regulator, MerR family 
Protein accessionYP_001878409 
Protein GI187736297 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.145688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.140149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC AGAAAAATCC ATCCGGCACC TACCGCCCTT CTTATGACCG CACCCCCAGA 
TACACTGTCA AGCAGGTTGC GGAAATGATG GAAATGTCAG CCTACACCAT CCGGTATTAC
GAAAACGCCG GATTAATCCC GGACGTGGAC CGCAGCGGAG GGAATGCCCG TATGTTTTCC
GACTACACCC TGGGGTGGCT CCGCCTGGTC CACTGCCTCC GGATGACGGG CCTCCCGATT
GAAGGCGTCA AGCACTACAT CGACCTGTGC CAGGAAGGGG ATTCCACCAT TCCGGAGCGC
GCCGAACTGA TCTTCAAGCA AGAGAAAAGT CTCCGGGAAC AGCTCCGAAT CCTGAAAAAA
CAAATGGAAG TGTTGAAATA CAAGAAAAAA TTTTATCAGG ATCTTTTAGA CAACCGCAGG
CCGGACAGCT GCAATCCGCT GAACTACATC AGCGCCAGCG AGCCGAACAT CGCGCCTGAG
GAATAA
 
Protein sequence
MIKQKNPSGT YRPSYDRTPR YTVKQVAEMM EMSAYTIRYY ENAGLIPDVD RSGGNARMFS 
DYTLGWLRLV HCLRMTGLPI EGVKHYIDLC QEGDSTIPER AELIFKQEKS LREQLRILKK
QMEVLKYKKK FYQDLLDNRR PDSCNPLNYI SASEPNIAPE E