Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1810 |
Symbol | |
ID | 6275077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2196923 |
End bp | 2197408 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642613874 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_001878409 |
Protein GI | 187736297 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.145688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.140149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC AGAAAAATCC ATCCGGCACC TACCGCCCTT CTTATGACCG CACCCCCAGA TACACTGTCA AGCAGGTTGC GGAAATGATG GAAATGTCAG CCTACACCAT CCGGTATTAC GAAAACGCCG GATTAATCCC GGACGTGGAC CGCAGCGGAG GGAATGCCCG TATGTTTTCC GACTACACCC TGGGGTGGCT CCGCCTGGTC CACTGCCTCC GGATGACGGG CCTCCCGATT GAAGGCGTCA AGCACTACAT CGACCTGTGC CAGGAAGGGG ATTCCACCAT TCCGGAGCGC GCCGAACTGA TCTTCAAGCA AGAGAAAAGT CTCCGGGAAC AGCTCCGAAT CCTGAAAAAA CAAATGGAAG TGTTGAAATA CAAGAAAAAA TTTTATCAGG ATCTTTTAGA CAACCGCAGG CCGGACAGCT GCAATCCGCT GAACTACATC AGCGCCAGCG AGCCGAACAT CGCGCCTGAG GAATAA
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Protein sequence | MIKQKNPSGT YRPSYDRTPR YTVKQVAEMM EMSAYTIRYY ENAGLIPDVD RSGGNARMFS DYTLGWLRLV HCLRMTGLPI EGVKHYIDLC QEGDSTIPER AELIFKQEKS LREQLRILKK QMEVLKYKKK FYQDLLDNRR PDSCNPLNYI SASEPNIAPE E
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