| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1798 |
|---|
| Symbol | |
|---|
| ID | 6274676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2185074 |
|---|
| End bp | 2186279 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613862 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_001878397 |
|---|
| Protein GI | 187736285 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.231865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.00490187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACG ATTTTGATAC TGTTGTTCCG CGCCGCGGCA CGAATTCCTA CAAGTGGGAT
TCCATGCCCC GGGAGGATAT TCTGCCCATG TGGGTGGCAG ACATGGATTT CCGTACGGCT
CCGGCGGTGA CGGACGCCAT CCGGAAGAGG GCCGAGCACG GCATTTTCGG TTATACACGG
GTTCCGGATT CCTATTATGA GGCGGTTACA AACTGGTTTG AACGCCGCCA CGGCTGGAAG
ATTAATCCGG AATGGATGAT TTATACCACG GGGGTGGTTC CCGCGCTGTC TGCCGTCATA
CGGGCCCTGA CGGTCCCTGG GGACAAGGTG CTGGTCCAGA CGCCTGTATA TAATTGCTTT
TTTTCCTCCA TCCGCAATAA CGGATGCGTG GCGGAAACCT GCCCTCTGAA ATATGAGAAC
GGCAGATATG CGCTGGATGC GGAGGAGCTG GAACGGAAAG CCTCCGATCC CGCCGTCAAG
CTGATGCTCC TGTGCAATCC CCATAATCCA GCCGGGCGCG TCTGGACGAG GGAAGAATTG
GAGGAGATGG CCGCCATTTG CCGGAGAAAC GGCGTTTTCA TAGTGGCTGA CGAGATTCAT
TGCGAACTGA CGTATCCGGG CCATCCCTAT ACGCCGTTCG CCTCCCTCTC CGAGGACGCC
CTGCACCATT CCGTCACCTG TATTTCCCCC AGCAAGGCGT TTAATCTGGC GGGCATTCAG
ATAGCCAATA TCGTCGCGGC GGATGAAGAA GTCCGGAAGA GGATTGACAA GGCTATCAAC
ATCAATGAGG TGTGTGACGT CAATTCTTTT GCCGTAGATG CCCTGGAAGC GGCTTATAAC
GGAGGGGAGG ACTGGTTGGA GGAACTGAAG CTCTACCTTT ACGGGAATTA CGAGATTGTC
CGGGATATGC TGGCAGAACG TCTGCCGCAG CTCCGTGTGG TGCCGCTGGA GGGAACGTAC
CTGGTCTGGA TAGATTGTTC CGCTCTGGGG CTTCCCTCCG CAGAGATTGT CCGCCTGCTG
GAAGAGGAGG GTCGGGTGCT CGTCAACGGC GGGGAAATGT ACGGGGAAAC GGCGGGGTGC
TTCATTCGCC TGAACGTCGC CTGTCCCAGG AAGCTGCTGC TTGAGGGGCT GGAAAGAATC
ATCCGCACGC TGTGCGGCCG CATTTCCGGA ACACGGACGT GCCCGTCGGG CCCTGCAGGC
TCTTAA
|
|---|
| Protein sequence | MKYDFDTVVP RRGTNSYKWD SMPREDILPM WVADMDFRTA PAVTDAIRKR AEHGIFGYTR
VPDSYYEAVT NWFERRHGWK INPEWMIYTT GVVPALSAVI RALTVPGDKV LVQTPVYNCF
FSSIRNNGCV AETCPLKYEN GRYALDAEEL ERKASDPAVK LMLLCNPHNP AGRVWTREEL
EEMAAICRRN GVFIVADEIH CELTYPGHPY TPFASLSEDA LHHSVTCISP SKAFNLAGIQ
IANIVAADEE VRKRIDKAIN INEVCDVNSF AVDALEAAYN GGEDWLEELK LYLYGNYEIV
RDMLAERLPQ LRVVPLEGTY LVWIDCSALG LPSAEIVRLL EEEGRVLVNG GEMYGETAGC
FIRLNVACPR KLLLEGLERI IRTLCGRISG TRTCPSGPAG S
|
|---|
| |